Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9J0
Confidence97.80%DateThu Jan 5 11:10:26 GMT 2012
Rank14Aligned Residues81
% Identity21%Templatec2khiA_
PDB info PDB header:ribosomal proteinChain: A: PDB Molecule:30s ribosomal protein s1; PDBTitle: nmr structure of the domain 4 of the e. coli ribosomal2 protein s1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  IEREARRGIVGNIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVV
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Template Sequence  WVAIAKRYPEGTKLTGRVTNLTDY. . GCFVEIEEGVEGLVHVSEMD. . . . . . . . . . . WTNKNIHPSKVVNVGDVVEVMVL
Template Known Secondary structure 


SS
SS
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TT..
STT
TTSSS...........
SSTT
SSTTT

TT
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   267..270.........280.........290 .........300.........310 .........320.........330...
 
   109110.........120..
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Query Sequence  KDPLGTKGARLTTD
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Template Sequence  DIDEERRRISLGLK
Template Known Secondary structure  TTTT


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   334.....340.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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