Job Description P0A9J0 Confidence 86.67% Date Thu Jan 5 11:10:26 GMT 2012 Rank 63 Aligned Residues 78 % Identity 12% Template c2ja9A_ PDB info PDB header:rna-binding protein Chain: A: PDB Molecule:exosome complex exonuclease rrp40; PDBTitle: structure of the n-terminal deletion of yeast exosome2 component rrp40 Resolution 2.20 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T	K
Query Conservation
Alig confidence																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	V	N	D	F	V	I	G	V	I	I	G	T	F	S	D	.	.	S	Y	K	V	S	L	Q	N	F	S	S	S	V	S	L	S	Y	M	A	F	P	N	A	.	.	.	.	.	.	.	.	.	.	.	.	S	K	K	N	R	P	T	L	Q	V	G	D	L	V	Y	A	R	V	C	T	A	E	K	E	L	E
Template Known Secondary structure				T	T												S	S	.	.						S	S	T	T	S							T	T	S	S	T	T		.	.	.	.	.	.	.	.	.	.	.	.		S	S	S						T	T												T	T	S
Template Predicted Secondary structure																			.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.													.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		116	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	L	T	T	D	I	T	L	P	S	R
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	E	I	E	C	F	D	S	T	T	G	R
Template Known Secondary structure		.					S	S		T	T	T		S
Template Predicted Secondary structure		.
Template SS confidence
			132	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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