Job Description P0A9J0 Confidence 91.45% Date Thu Jan 5 11:10:26 GMT 2012 Rank 56 Aligned Residues 109 % Identity 10% Template c2ckzB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna-directed rna polymerase iii 25 kd PDBTitle: x-ray structure of rna polymerase iii subcomplex c17-c25. Resolution 3.2 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	G	I	L	Q	E	I	H	I	E	R	E	A	R	R	G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q
Query Conservation
Alig confidence																																	.	.
Template Conservation																																	.	.
Template Sequence		D	G	S	S	Y	I	N	V	T	F	R	A	V	V	F	K	P	F	L	G	E	I	V	T	G	W	I	S	K	C	T	.	.	A	E	G	I	K	V	S	L	L	G	I	F	D	D	I	F	I	P	Q	N	M	L	F	E	G	C	Y	Y	T	P	E	E	S	A	W	I	W	P	M	D	T	K	L	Y	F	D	V
Template Known Secondary structure		S	S																	T	T												.	.	T	T							T	T	S								T	T	T	S		T	T					T	T	T	T														T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		G	Q	D	L	M	V	Q	V	V	K	D	P	.	L	G	T	K	G	A	R	L	T	T	D	I	T	L	P	S	R	Y	L
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		N	E	K	I	R	F	R	I	E	R	E	V	F	V	D	V	K	P	P	A	Y	A	L	L	G	S	C	Q	T	D	G	M
Template Known Secondary structure		T																			S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions