Job Description P0A9J0 Confidence 94.51% Date Thu Jan 5 11:10:26 GMT 2012 Rank 48 Aligned Residues 68 % Identity 24% Template c2asbA_ PDB info PDB header:transcription/rna Chain: A: PDB Molecule:transcription elongation protein nusa; PDBTitle: structure of a mycobacterium tuberculosis nusa-rna complex Resolution 1.50 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.										.	.	.
Query SS confidence																				.	.										.	.	.
Query Sequence		R	G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	.	.	M	Q	A	A	F	V	D	I	G	.	.	.	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K
Query Conservation																				.	.										.	.	.
Alig confidence																				.	.										.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	T	R	E	G	E	I	V	A	G	V	I	Q	R	D	S	R	A	N	A	R	G	L	V	V	V	R	I	G	T	E	T	K	A	S	E	G	V	I	P	A	A	E	Q	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S	Y	E	H	G	N	R	L	R	C	Y	V	V	G
Template Known Secondary structure					T	T																T	T								S	S	S	S								G	G	G	S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	L	G	T	K	G	A	R	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	R	G	A	R	E	P	L	I	T
Template Known Secondary structure						S	S	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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