Job Description P0A9J0 Confidence 54.72% Date Thu Jan 5 11:10:26 GMT 2012 Rank 88 Aligned Residues 65 % Identity 23% Template c1x65A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:unr protein; PDBTitle: solution structure of the third cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	.	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T	K	G	A	R	L	T
Query Conservation																								.
Alig confidence												.	.											.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	G	V	I	A	A	M	R	D	.	.	G	F	G	F	I	K	C	V	D	R	D	V	R	M	F	F	H	F	S	E	I	L	D	G	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	I	A	D	E	V	E	F	T	V	V	P	D	M	L	S	A	Q	R	N	H	A	I
Template Known Secondary structure											T	.	.	T	B						S	S	S	S	S					B	T	T	G	G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T								B			S	S	S					B
Template Predicted Secondary structure												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		121	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	I	T	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	K	K	L	P
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions