Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9J0
Confidence97.84%DateThu Jan 5 11:10:26 GMT 2012
Rank12Aligned Residues87
% Identity23%Templatec1q8kA_
PDB info PDB header:translationChain: A: PDB Molecule:eukaryotic translation initiation factor 2 PDBTitle: solution structure of alpha subunit of human eif2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60. ........70.........80.........90.........100.........110.....
Predicted Secondary structure 







..


































Query SS confidence 























. .





















































Query Sequence  VGNIYKGRVSRVLPGMQAAFVDIG. . LDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTK
Query Conservation   



 


  
 
 
 






..  
 


   

                   
   
  
  




 

    
Alig confidence 














..






..















............



















......
Template Conservation   
 

 
 
  
   ..
  
 
     
 
 

 



   ............
       


  
  


 ......
Template Sequence  VEDVVMVNVRSIQEM. . GAYVSLLEYNNIEGMIHLSELSRRR. . . . . . . . . . . . IRSINKLIRIGRNECVKVIR. . . . . .
Template Known Secondary structure  S

TT..S
TTTS


GGGTS
SS............
S

TTT
SSS
......
Template Predicted Secondary structure 




..










............







......
Template SS confidence 















































































   15....20......... 30.........40.........50.... .....60.........70....
 
   116...120.........130.........140.........150.........160
Predicted Secondary structure 










Query SS confidence 












































Query Sequence  GARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
Query Conservation 

 

  


 





 
    






     
 


     
Alig confidence  ................




























Template Conservation  ................

   
 
 

 
 
   
          
Template Sequence  . . . . . . . . . . . . . . . . VDKEKGYIDLSKRRVSPEEAIKCEDKFTK
Template Known Secondary structure  ................TTTT
SS

Template Predicted Secondary structure  ................







Template SS confidence 












































   75....80.........90.........100...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions