Job Description P0A9J0 Confidence 95.40% Date Thu Jan 5 11:10:26 GMT 2012 Rank 45 Aligned Residues 88 % Identity 9% Template c1nt9G_ PDB info PDB header:transcription, transferase Chain: G: PDB Molecule:dna-directed rna polymerase ii 19 kd polypeptide; PDBTitle: complete 12-subunit rna polymerase ii Resolution 4.20 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T
Query Conservation
Alig confidence																			.	.											.															.	.
Template Conservation																			.	.											.															.	.
Template Sequence		K	P	F	K	G	E	V	V	D	G	T	V	V	S	C	S	Q	.	.	H	G	F	E	V	Q	V	G	P	M	.	K	V	F	V	T	K	H	L	M	P	Q	D	L	T	.	.	F	N	A	G	S	N	P	P	S	Y	Q	S	S	E	D	V	I	T	I	K	S	R	I	R	V	K	I	E	G	C	I	S	Q	V
Template Known Secondary structure					T	T												T	.	.	T							S	S	S	.						T	T	T	S	S	S	S			.	.		B	T	T					S	S	S						S	S														S	S
Template Predicted Secondary structure																			.	.											.															.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	R	L	T	T	D	I	T	L	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	I	H	A	I	G	S	I	K	E	D	Y
Template Known Secondary structure										S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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