Job Description P0A6J3 Confidence 5.67% Date Thu Jan 5 11:03:16 GMT 2012 Rank 7 Aligned Residues 84 % Identity 11% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	K	F	A	W	Y	L	P	R	A	I	V	L	L	I	L	Y	F	I	P	G	I	G	Q	T	V	A	P	V	L	W	F	L	F	S	A	W	M	L	A	I	Q	Y	C	D	Y	P	F	D	N	H	K	V	P	F	K	E	M	R	T	A	L	R	T	R	K	I	T	N	M	Q	F	G	A	L	T	S	L	F
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	.	.	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L	M	D	K	E	G	K	G	L	I	E	A	T	L	D	A	V	R	M	R	L	R	P	I	L	M	T	S	L	A	F	I	L
Template Known Secondary structure														T	T			B											.	.																				T	T	S	S				T	T									T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		907	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.			.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.
		220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	I	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	M	P	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		985	.	.	.	.	990

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions