Job Description P0A6J3 Confidence 1.48% Date Thu Jan 5 11:03:16 GMT 2012 Rank 96 Aligned Residues 207 % Identity 13% Template c3k07A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:cation efflux system protein cusa; PDBTitle: crystal structure of cusa Resolution 3.52 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		Q	P	G	I	R	R	F	V	I	L	P	L	L	V	N	I	L	L	M	G	G	A	F	W	W	L	F	T	Q	L	D	.	V	W	I	P	T	L	M	S	Y	V	P	D	W	L	Q	W	L	S	Y	L	L	W	P	L	A	V	I	S	V	L	L	V	F	G	Y	F	F	S	T	I	A	N	W	I	A	A	P	F
Query Conservation																																	.
Alig confidence																																	.
Template Conservation
Template Sequence		R	S	Q	L	I	D	R	A	I	D	N	L	S	G	K	L	L	E	E	F	I	V	V	A	V	V	C	A	L	F	L	W	H	V	R	S	A	L	V	A	I	I	S	L	P	L	G	L	C	I	A	F	I	V	M	H	F	Q	G	L	N	A	N	I	M	S	L	G	G	I	A	I	A	V	G	A	M	V	D	A
Template Known Secondary structure		T																																									T																	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	L	L	A	E	Q	L	E	A	R	L	T	G	A	T	P	P	D	T	G	I	F	G	I	M	K	D	V	P	R	I	M	K	R	E	W	Q	K	F	A	W	Y	L	P	R	A	I	V	L	L	I	L	Y	F	I	P	G	.	.	.	.	.	.	.	.	.	.	I	G	Q	T	V	A	P	V	L	W	F	L
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	V	M	I	E	N	A	H	K	R	L	E	E	W	Q	H	Q	H	P	D	A	T	L	D	N	K	T	R	W	Q	V	I	T	D	A	S	V	E	V	G	P	A	L	F	I	S	L	L	I	I	T	L	S	F	I	P	I	F	T	L	E	G	Q	E	G	R	L	F	G	P	L	A	F	T	K	T	Y	A	M
Template Known Secondary structure																				S		S	S																		S																G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	A	W	M	L	A	I	Q	Y	C	D	Y	P	F	D	N	H	K	V	P	F	K	E	M	R	T	A	L	R	T	R	K	I	T	N	M	Q	F	G	A	L	T	S	L	F	T	M	I	P	L	L	N	L	F	I	M	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	A	A	L	L	A	I	V	V	I	P	I	L	M	G	Y	W	P	L	N	R	F	L	I	R	V	Y	H	P	L	L	L	K	V	L	H	W	P	K	T	T	L	L	V	A	A	L	S	V	L	T	V	L	W	P	L	N
Template Known Secondary structure											T																																										T	T					T
Template Predicted Secondary structure
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions