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Job DescriptionP33225
Confidence100.00%DateThu Jan 5 11:51:24 GMT 2012
Rank17Aligned Residues604
% Identity47%Templated1eu1a2
SCOP infoFormate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3 Formate dehydrogenase/DMSO reductase, domains 1-3
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80.........90.........100.........110.........120.........130
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Query Sequence  EGILTGSHWGAIRATVKDGRFVAAKPFELDKYPSKMIAGLPDHVHNAARIRYPMVRVDWLRKRHLSDTSQRGDNRFVRVS
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Template Sequence  EVMSGCHWGV. FKARVENGRAVAFEPWDKDPAPSHQLPGVLDSIYSPTRIKYPMVRREFLEKGVNADRSTRGNGDFVRVT
Template Known Secondary structure  TT.TT
TT
SS

TTTTTSTTB

S
GGGS
GGGTTSS


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   7..10...... ...20.........30.........40.........50.........60.........70.........80.....
 
   131........140.........150........ .160.........170.........180.........190.........200.........
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Query Sequence  WDEALDMFYEELERVQKTHGPSALLTAS. GWQSTGMFHNASGMLAKAIALHGNSVGTGGDYSTGAAQVILPRVVGSMEVY
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Template Sequence  WDEALDLVARELKRVQESYGPTGTFGGSYGWKSPGRLHNCQVLMRRALNLAGGFVNSSGDYSTAAAQIIMPHVMGTLEVY
Template Known Secondary structure 
GGG









SS

T

BS
SSSTTTSS

TT
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   210.........220.........230.........240.........250.........260.........270.........280. .......
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Query Sequence  EQQTSWPLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKVAAGEIEVISIDPVVTSTHEYLGR. EHVKHIA
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Template Sequence  EQQTAWPVVVENTDLMVFWAADPMKTNEIGWVIPDHGA. . . . . YAGMKALKEKGTRVIINPVRTET. . . . ADYFGADVVS
Template Known Secondary structure  S

S

SS

TT

SSB


.....T



SS

....T




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   166...170.........180.........190.........200... ......210.........220...... ...230......
 
   289290.........300.........310.........320.........330.........340.........350.........360........
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Query Sequence  VNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQPKDAAWAEKLTGIDAETIRGLARQMAANRTQ
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Template Sequence  PRPQTDVALMLGMAHTLYSEDLHDKDFLENCTTGFDLFAAYLTGESDGTPKTAEWAAEICGLPAEQIRELARSFVAGRTM
Template Known Secondary structure 

TT
TT
S

TTTTTS




S
SS
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   238.240.........250.........260.........270.........280.........290.........300.........310.......
 
   369370.........380.........390.........400.........410.........420.........430.........440........
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Query Sequence  IIAGWCVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYNGAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYSST
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Template Sequence  LAAGWSIQRMHHGEQAHWMLVTLASMIGQIGLPGGGFGLSYHYSNGGSPTSDGPALGGISDGGEGGA. . . . . . . . . . . TS
Template Known Secondary structure 
SGGGSSTTTT
TTSTT
S
TTSTTTTS


S














...........S
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   318.320.........330.........340.........350.........360.........370.........380.... ..
 
   449450.........460.........470.........480.........490.........500.........510.........520........
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Query Sequence  IPIARFIDAILEPGKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGLRKLETVIAIDNQWTSTCRFADIVLPAT
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Template Sequence  IPCARVVDMLLNPGGEFQFNGATATYPDVKLAYWAGGNPFAHHQDRNRMLKAWEKLETFIVQDFQWTATARHADIVLPAT
Template Known Secondary structure  GGG
TT
TT




S

SS
GGG
SSB

T
SB
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   397..400.........410.........420.........430.........440.........450.........460.........470......
 
   529530.........540.........550.........560.........570.........580.........590.........600........
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Query Sequence  TQFERNDLDQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHL
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Template Sequence  TSYERNDIESVGDYSNRAILAMKKVVDPLYEARSDYDIFAALAERLGKGAEFTEGRDEMGWISSFYEAAVKQAEFKNVAM
Template Known Secondary structure 
GGGS

TTT




S


TT
B
TT
TT

TT


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   477..480.........490.........500.........510.........520.........530.........540.........550......
 
   609610.........620........ .630.........640.........650.........660.........670.....
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Query Sequence  PAFDDFWNNKEYVEFDHPQM. FVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNYDDCQGHPMWFEK
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Template Sequence  PSFEDFWSEGIVEFPITEGANFVRYADFREDPLFNPLGTPSGLIEIYSKNIEKMGYDDCPAHPTWMEP
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SGGGG

TT
TTTS

SSTTSSSS


TTS
SS





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   557..560.........570.........580.........590.........600.........610.........620....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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