Job Description P33225 Confidence 29.52% Date Thu Jan 5 11:51:24 GMT 2012 Rank 156 Aligned Residues 112 % Identity 12% Template c3shoA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator, rpir family; PDBTitle: crystal structure of rpir transcription factor from sphaerobacter2 thermophilus (sugar isomerase domain) Resolution 1.80 Å

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	E	R	V	Q	K	T	H	G	P	S	A	L	L	T	A	S	G	W	Q	S	T	G	M	F	H	N	A	S	G	M	L	A	K	A	I	A	L	H	G	N	S	V	G	T	G	G	D	Y	S	T	G	A	A	Q	V	I	L	P	R	V	V	G	S	M	E	V	Y	E	Q	Q	T	S	W	P	L	V	L
Query Conservation
Alig confidence																					.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	I	E	A	A	V	E	A	I	R	A	D	H	V	I	V	V	G	.	.	.	.	X	G	F	S	A	A	V	A	V	F	L	G	H	G	L	N	S	L	G	I	R	T	T	V	L	T	E	G	G	S	T	L	T	I	T	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L
Template Known Secondary structure														S							.	.	.	.		G	G	G														T	T										T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																					.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																			.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	S	K	T	I	V	L	W	G	S	D	L	L	K	N	Q	Q	A	N	W	W	C	P	D	H	D	V	Y	E	Y	Y	A	Q	L	K	A	K	V	A	A	G	E	I	E	V	I	S	I	D	P	V	V	T	S	T	H	E	Y	L	G	R	E	H	V	K	H	I	A	V	N
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		R	P	T	D	L	X	I	G	V	S	V	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	L	R	D	T	V	A	A	L	A	G	A	A	E	R	G	V	P	T	X	A	L	T	D	S	S	V	S	P	.	.	.	P	A	R	I	A	D	H	V	L	V	A	A
Template Known Secondary structure			T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	T								S		T	T	S		.	.	.						S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.															.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions