Job Description P33225 Confidence 94.53% Date Thu Jan 5 11:51:24 GMT 2012 Rank 55 Aligned Residues 187 % Identity 11% Template c3knzA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative sugar binding protein; PDBTitle: crystal structure of putative sugar binding protein (np_459565.1) from2 salmonella typhimurium lt2 at 2.50 a resolution Resolution 2.50 Å

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		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	F	Y	E	E	L	E	R	V	Q	K	T	H	G	P	S	A	L	L	T	A	S	G	W	Q	S	T	G	M	F	H	N	A	S	G	M	L	A	K	A	I	A	L	H	G	N	S	V	G	T	G	G	D	Y	S	T	G	A	A	Q	V	I	L	P	R	V	V	G	S	M	E	V	Y	E	Q	Q	T	S	W	P
Query Conservation
Alig confidence																								.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	D	L	W	R	A	A	Q	A	L	T	E	R	G	V	T	R	I	I	L	T	G	.	.	.	.	S	G	T	S	Y	H	G	A	L	T	A	R	T	F	X	Q	R	W	C	A	L	P	V	D	V	C	W	P	F	X	L	D	D	E	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T									.	.	.	.																				T	S							G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	L	Q	N	S	K	T	I	V	L	W	G	S	D	L	L	K	N	Q	Q	A	N	W	W	C	P	D	H	D	V	Y	E	Y	Y	A	Q	L	K	A	K	V	A	A	G	E	I	E	V	I	S	I	D	P	V	V	T	S	T	H	E	Y	L	G	R	E	H	V	K	H	I	A	V	N	P	Q	T	D	V	P
Query Conservation
Alig confidence		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		.	A	R	S	G	K	A	L	V	V	G	I	S	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S	L	S	T	L	A	A	X	E	R	A	R	N	V	G	H	I	T	A	S	X	A	G	V	A	P	A	T	.	.	.	I	D	R	A	A	D	Y	I	L	T	V	P	C	G	E	T	K	G
Template Known Secondary structure		.			S		S								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S															T	T								S	S	S	S		G	.	.	.	G	G	G	G		S											T
Template Predicted Secondary structure		.															.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
			75	.	.	.	.	80	.	.	.	.	.	.	.	.															.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		297								.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.
Query Sequence		L	.	.	.	.	.	.	.	Q	L	A	L	A	H	T	L	Y	S	E	N	L	Y	D	K	N	F	L	A	N	Y	C	V	G	F	E	Q	F	L	P	Y	L	L	G	E	K	D	G	Q	P	K	D	A	A	W	A	E	K	L	T	G	I	D	A	E	T	I	R	G	L	A	R	Q	M	A	A	N	R	T	Q	I
Query Conservation			.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	H	C	T	V	L	N	L	X	L	L	A	L	A	V	A	G	Q	Q	Q	R	L	D	G	E	Q	R	R	S	L	L	L	R	X	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	N	H	L	P	A	L	V	T	A	S	Q	A	W	A	Q	T	N	A	L	A	L	R	D	S	A	D	I	R
Template Known Secondary structure																				T	T		S															.	.	.	.	.	.	.	.	.	.	.	.	.	.																			T						T		S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.															.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	G	W	C	V	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	G	P	A	T	L	F
Template Known Secondary structure						G	G	G
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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