Job Description P33225 Confidence 89.27% Date Thu Jan 5 11:51:24 GMT 2012 Rank 72 Aligned Residues 146 % Identity 16% Template c3fxaA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:sis domain protein; PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution Resolution 1.60 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	L	D	M	F	Y	E	E	L	E	R	V	Q	K	T	H	G	P	S	A	L	L	T	A	S	G	W	Q	S	T	G	M	F	H	N	A	S	G	M	L	A	K	A	I	A	L	H	G	N	S	V	G	T	G	G	D	Y	S	T	G	A	A	Q	V	I	L	P	R	V	V	G	S	M	E	V	Y	E	Q
Query Conservation
Alig confidence															.	.	.	.	.	.														.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.														.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	A	L	V	K	T	V	E	K	I	A	E	.	.	.	.	.	.	C	T	G	K	I	V	V	A	G	C	G	T	S	.	.	.	G	V	A	A	K	K	L	V	H	S	F	N	C	I	E	R	P	A	V	F	L	T	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A
Template Known Secondary structure															.	.	.	.	.	.		S	S								T			.	.	.														T	T										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.														.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																				80	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	S	W	P	L	V	L	Q	N	S	K	T	I	V	L	W	G	S	D	L	L	K	N	Q	Q	A	N	W	W	C	P	D	H	D	V	Y	E	Y	Y	A	Q	L	K	A	K	V	A	A	G	E	I	E	V	I	S	I	D	P	V	V	T	S	T	H	E	Y	L	G	R	E	H	V	K	H	I	A	V	N	P
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Sequence		V	H	G	T	L	G	V	L	Q	K	E	D	I	L	I	L	I	S	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	T	G	E	L	L	N	L	I	P	A	C	K	T	K	G	S	T	L	I	G	V	T	E	N	P	D	S	V	.	.	.	I	A	K	E	A	D	I	F	F	P	V	S	V
Template Known Secondary structure		T	T	T	G	G	G	G			T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							T	T								T								S		T	T	S		.	.	.						S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.															.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.
		292	.	.												.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Query Sequence		Q	T	D	.	.	.	.	.	.	.	.	.	.	.	V	P	L	Q	L	A	L	A	H	T	L	Y	.	.	.	.	.	S	E	N	L	Y	D	K	N	F	L	A	N	Y	C	V	G
Query Conservation					.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		S	K	E	P	D	P	F	N	X	L	A	T	A	S	T	X	A	V	I	A	S	F	D	A	V	I	V	C	L	X	T	Y	X	N	Y	T	K	E	Q	F	S	V	I	H	P	G	G
Template Known Secondary structure		S				S	T	T	S		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions