Job Description P33225 Confidence 41.12% Date Thu Jan 5 11:51:24 GMT 2012 Rank 132 Aligned Residues 194 % Identity 18% Template c3eyaE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:pyruvate dehydrogenase [cytochrome]; PDBTitle: structural basis for membrane binding and catalytic2 activation of the peripheral membrane enzyme pyruvate3 oxidase from escherichia coli Resolution 2.50 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	L	D	M	F	Y	E	E	L	E	R	V	Q	K	T	H	G	P	S	A	L	L	T	A	S	G	W	Q	S	T	G	M	F	H	N	A	S	G	M	L	A	K	A	I	A	L	H	G	N	S	V	G	T	G	G	D	Y	S	T	G	A	A	Q	V	I	L	P	R	V	V	G	S	M	E	V	Y	E	Q
Query Conservation
Alig confidence															.	.	.	.	.	.														.	.	.	.																					.
Template Conservation															.	.	.	.	.	.														.	.	.	.																					.
Template Sequence		E	E	E	L	R	K	L	A	Q	L	L	R	Y	.	.	.	.	.	.	S	S	N	I	A	L	M	C	G	S	G	C	A	.	.	.	.	G	A	H	K	E	L	V	E	F	A	G	K	I	K	A	P	I	V	H	A	.	L	R	G	K	E	H	V	E	Y	D	N	P	Y	D	V	G	M	T	G	L	I	G	F
Template Known Secondary structure														T	.	.	.	.	.	.			S							G	G	G	T	.	.	.	.	T													T							.	G	G	G					S	S	S		T	T	B					S	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.														.	.	.	.																					.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	S	W	P	L	V	L	Q	N	S	K	T	I	V	L	W	G	S	D	L	L	K	N	Q	Q	A	N	W	W	C	P	D	H	D	V	Y	E	Y	Y	A	Q	L	K	A	K	V	A	A	G	E	I	E	V	I	S	I	D	P	V	V	T	S	T	H	E	Y	L	G	R	E	H	V	K	H	I	A	V	N	P
Query Conservation
Alig confidence							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.												.
Template Conservation							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.												.
Template Sequence		S	S	G	F	H	.	T	M	M	N	A	D	T	L	V	L	L	G	T	Q	F	P	Y	R	A	F	Y	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	K	I	I	Q	I	D	I	N	P	A	S	I	.	.	.	.	G	A	H	S	K	V	D	M	A	L	V	.
Template Known Secondary structure							.						S						S						G	G	G	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S							S		G	G	G	T	.	.	.	.	T	S	S	S			S					.
Template Predicted Secondary structure							.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.												.
Template SS confidence
		257	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.																						.	.	.	.	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	D	V	P	L	Q	L	A	L	A	H	T	L	Y	S	E	N	L	Y	D	K	N	F	L	A	N	Y	C	V	G	F	E	Q	F	L	P	Y	L	L	G	E	K	D	G	Q	P	K	D	A	A	W	A	E	K	L	T	G	I	D	A	E	T	I	R	G	L	A	R	Q	M	A	A	N	R	T	Q	I	I	A
Query Conservation
Alig confidence		.																	.																						.	.	.	.	.	.	.	.	.
Template Conservation		.																	.																						.	.	.	.	.	.	.	.	.
Template Sequence		.	G	D	I	K	S	T	L	R	A	L	L	P	L	V	E	E	.	K	A	D	R	K	F	L	D	K	A	L	E	D	Y	R	D	A	R	K	G	L	.	.	.	.	.	.	.	.	.	D	D	L	A	K	P	S	E	K	A	I	H	P	Q	Y	L	A	Q	Q	I	S	H	F	A	A	D	D	A	I	F	T	C
Template Known Secondary structure		.											G	G	G	S			.																						.	.	.	.	.	.	.	.	.				S				S	S		B													S		T	T
Template Predicted Secondary structure		.																	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.										.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		372	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	G
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		379	380	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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