Job Description P33225 Confidence 86.84% Date Thu Jan 5 11:51:24 GMT 2012 Rank 82 Aligned Residues 151 % Identity 14% Template c3etnD_ PDB info PDB header:isomerase Chain: D: PDB Molecule:putative phosphosugar isomerase involved in capsule PDBTitle: crystal structure of putative phosphosugar isomerase involved in2 capsule formation (yp_209877.1) from bacteroides fragilis nctc 93433 at 1.70 a resolution Resolution 1.70 Å

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		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	W	D	E	A	L	D	M	F	Y	E	E	L	E	R	V	Q	K	T	H	G	P	S	A	L	L	T	A	S	G	W	Q	S	T	G	M	F	H	N	A	S	G	M	L	A	K	A	I	A	L	H	G	N	S	V	G	T	G	G	D	Y	S	T	G	A	A	Q	V	I	L	P	R	V	V	G	S	M	E	V
Query Conservation
Alig confidence																		.	.	.	.	.	.														.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.														.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	Y	E	K	A	V	E	L	I	V	E	Q	I	H	R	.	.	.	.	.	.	K	K	G	K	L	V	T	S	G	X	G	K	A	.	.	.	G	Q	I	A	X	N	I	A	T	T	F	C	S	T	G	I	P	S	V	F	L	H	P	S	E	A	Q	H	G	D	L	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T													T	T	T	.	.	.	.	.	.	T									S				.	.	.														T	T								T	T	G	G	G	G	T	G	G	G	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.														.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	E	Q	Q	T	S	W	P	L	V	L	Q	N	S	K	T	I	V	L	W	G	S	D	L	L	K	N	Q	Q	A	N	W	W	C	P	D	H	D	V	Y	E	Y	Y	A	Q	L	K	A	K	V	A	A	G	E	I	E	V	I	S	I	D	P	V	V	T	S	T	H	E	Y	L	G	R	E	H	V	K	H	I	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	I	L	Q	E	N	D	L	L	L	L	I	S	.	.	.	.	.	.	.	.	.	.	.	.	N	S	G	K	T	R	E	I	V	E	L	T	Q	L	A	H	N	L	N	P	G	L	K	F	I	V	I	T	G	N	P	D	S	P	.	.	.	L	A	S	E	S	D	V	C	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	G			T	T								.	.	.	.	.	.	.	.	.	.	.	.	S	S	S																	T	T								S		T	T	S		.	.	.					S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
											84	.	.	.	.	.	90	.	.	.	.	.													.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.
		289	290	.	.	.	.																.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Query Sequence		V	N	P	Q	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	L	Q	L	A	L	A	H	T	L	Y	S	E	.	N	L	Y	D	K	N	F	L	A	N	Y	C	V	G
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		T	G	H	P	A	E	V	C	T	L	G	X	T	P	T	T	S	T	T	V	X	T	V	I	G	D	I	L	V	V	Q	T	X	K	R	T	E	F	T	I	E	E	Y	S	K	R	H	H	G	G
Template Known Secondary structure									S	T	T	S		S	S	S																						T								T	T	S		G	G
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions