Return to main results Retrieve Phyre Job Id

Job DescriptionP33225
Confidence27.84%DateThu Jan 5 11:51:24 GMT 2012
Rank161Aligned Residues28
% Identity21%Templatec2yu1A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:jmjc domain-containing histone demethylation protein 1a; PDBTitle: crystal structure of hjhdm1a complexed with a-ketoglutarate
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   760... ......770.........780.........
Predicted Secondary structure 



.





















Query SS confidence 



.

























Query Sequence  YAPG. VARIHEGAWYDPDKGGEPGALCKYGN
Query Conservation 
 

. 
    
 
              

 
Alig confidence 



.

















..





Template Conservation 
 










 


 
 


..


 

Template Sequence  LKQGYTFVIPSGWIHAVYTPTDT. . LVFGGN
Template Known Secondary structure 
TT

TT

SS
..
Template Predicted Secondary structure 












..

Template SS confidence 






























   270.........280.........290.. ......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions