Job Description P33225 Confidence 85.77% Date Thu Jan 5 11:51:24 GMT 2012 Rank 85 Aligned Residues 184 % Identity 8% Template c2x7jA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis Resolution 2.35 Å

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		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	L	D	M	F	Y	E	E	L	E	R	V	Q	K	T	H	G	P	S	A	L	L	T	A	S	G	W	Q	S	T	G	M	F	H	N	A	S	G	M	L	A	K	A	I	A	L	H	G	N	S	V	G	T	G	G	D	Y	S	T	G	A	A	Q	V	I	L	P	R	V	V	G	S	M	E	V	Y	E	Q
Query Conservation
Alig confidence															.	.	.	.	.	.														.	.	.
Template Conservation															.	.	.	.	.	.														.	.	.
Template Sequence		R	E	S	L	S	D	V	A	E	M	L	A	E	.	.	.	.	.	.	A	E	K	G	M	I	V	C	G	E	L	H	S	.	.	.	D	A	D	K	E	N	I	I	A	L	S	K	A	L	Q	Y	P	I	L	A	D	P	L	S	N	L	R	N	G	V	H	D	K	S	T	V	I	D	A	Y	D	S	F	L	K
Template Known Secondary structure		T	G	G	G										.	.	.	.	.	.		S	S											.	.	.															T							G	G	G	T	T	T	B	S	S	S			T	T									T	T
Template Predicted Secondary structure															.	.	.	.	.	.														.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.							.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	S	W	P	L	V	L	Q	N	S	K	T	I	V	L	W	G	S	D	L	L	K	N	Q	Q	A	N	W	W	C	P	D	H	D	V	Y	E	Y	Y	A	Q	L	K	A	K	V	A	A	G	E	I	E	V	I	S	I	D	P	V	V	T	S	T	H	E	Y	L	G	R	E	H	V	K	H	I	A	V	N	P
Query Conservation
Alig confidence							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Sequence		D	D	E	L	K	.	R	K	L	R	P	D	V	V	I	R	F	G	P	M	P	V	S	K	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	L	W	L	K	D	D	P	T	I	Q	Q	I	V	I	D	E	D	G	G	W	R	.	.	.	.	D	P	T	Q	A	S	A	H	M	I	H	C
Template Known Secondary structure		S					.						S						S	S			S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S							T	T					.	.	.	.		T	T	S			S					S
Template Predicted Secondary structure							.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template SS confidence
		277	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300																	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.					.	.	.	.	.	.	330	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	D	V	P	L	Q	L	A	L	A	H	T	L	Y	S	E	N	L	Y	D	K	N	F	L	A	N	Y	C	V	G	F	E	Q	F	L	P	Y	L	L	G	E	K	D	G	Q	P	K	D	A	A	W	A	E	K	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	N	A	S	V	F	A	E	E	I	M	A	G	L	T	A	A	T	R	S	S	E	W	L	E	K	W	Q	F	V	N	G	R	F	R	E	H	L	Q	T	I	S	S	E	D	V	S	F	E	G	N	L	Y	R	I
Template Known Secondary structure		.	.												T	S		S	S																							T	S					T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions