Job Description P33225 Confidence 100.00% Date Thu Jan 5 11:51:24 GMT 2012 Rank 16 Aligned Residues 644 % Identity 21% Template c2iv2X_ PDB info PDB header:oxidoreductase Chain: X: PDB Molecule:formate dehydrogenase h; PDBTitle: reinterpretation of reduced form of formate dehydrogenase h2 from e. coli Resolution 2.27 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.					.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.																.	.	.	.
Query SS confidence																																						.	.	.	.																.	.	.	.
Query Sequence		I	S	K	E	G	I	L	T	G	S	H	W	G	A	I	R	A	T	V	K	D	G	R	F	V	A	A	K	P	F	E	L	D	K	Y	P	.	.	.	.	S	K	M	I	A	G	L	P	D	H	V	H	N	A	A	.	.	.	.	R	I	R	Y	P	M	V	R	V	D	W	L	R	K	R	H	L	S	D	T	S
Query Conservation																																						.	.	.	.																.	.	.	.
Alig confidence																																	.					.	.	.	.																.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.																																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	V	T	V	C	P	Y	C	A	S	G	C	K	I	N	L	V	V	D	N	G	K	I	V	R	A	E	A	A	Q	.	G	K	T	N	Q	G	T	L	C	L	K	G	Y	Y	G	W	D	F	I	N	D	T	Q	I	L	T	P	R	L	K	T	P	M	I	R	R	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S	B	T	T										T	T										.		T	T	T	T	T									T	T	G	G	G	G				S	S	S		B			S						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.																																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		Q	R	G	D	N	R	F	V	R	V	S	W	D	E	A	L	D	M	F	Y	E	E	L	E	R	V	Q	K	T	H	G	P	S	A	L	L	T	A	S	G	W	Q	S	T	G	M	F	H	N	A	S	G	M	L	A	K	A	I	A	L	H	G	N	S	.	V	G	T	G	G	D	Y	S	T	G	A	A	Q	V	I
Query Conservation																																																																		.
Alig confidence		.																																													.	.																		.
Template Conservation		.																																													.	.
Template Sequence		.	Q	R	G	G	K	L	E	P	V	S	W	D	E	A	L	N	Y	V	A	E	R	L	S	A	I	K	E	K	Y	G	P	D	A	I	Q	T	T	G	S	S	R	G	T	G	.	.	N	E	T	N	Y	V	M	Q	K	F	A	R	A	V	I	G	T	N	N	V	D	C	C	A	R	V	H	G	P	S	V	A	G
Template Known Secondary structure		.	S	T	T	S																											G	G	G							S	S	T	T		.	.														T	T								S	S					S	S	S		S
Template Predicted Secondary structure		.																																													.	.
Template SS confidence
			70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	R	V	V	G	S	M	E	V	Y	E	Q	Q	T	S	W	P	L	V	L	Q	N	S	K	T	I	V	L	W	G	S	D	L	L	K	N	Q	Q	A	N	W	W	C	P	D	H	D	V	Y	E	Y	Y	A	Q	L	K	A	K	V	A	A	G	E	I	E	V	I	S	I	D	P	V	V	T	S	T	H	E	Y
Query Conservation
Alig confidence									.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation									.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		L	H	Q	S	V	G	N	.	.	.	.	G	A	M	S	N	A	I	N	E	I	D	N	T	D	L	V	F	V	F	G	Y	N	P	A	D	S	H	P	I	V	A	.	.	.	.	.	.	.	.	.	.	.	.	N	H	V	I	N	A	K	R	N	G	A	K	I	I	V	C	D	P	R	K	I	E	T	.	.	.
Template Known Secondary structure							S		.	.	.	.		S		S	S		G	G	G	G	G	G		S						S												.	.	.	.	.	.	.	.	.	.	.	.									T	T								S	S					.	.	.
Template Predicted Secondary structure									.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		148	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.													.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	R	E	H	V	K	H	I	A	V	N	P	Q	T	D	V	P	L	Q	L	A	L	A	H	T	L	Y	S	E	N	L	Y	D	K	N	F	L	A	N	Y	C	V	G	F	E	Q	F	L	P	Y	L	L	G	E	K	D	G	Q	P	K	D	A	A	W	A	E	K	L	T	G	I	D	A	E	T	I	R	G	L
Query Conservation
Alig confidence		.																																																				.	.	.	.	.	.
Template Conservation		.																																																				.	.	.	.	.	.
Template Sequence		.	A	R	I	A	D	M	H	I	A	L	K	N	G	S	N	I	A	L	L	N	A	M	G	H	V	I	I	E	E	N	L	Y	D	K	A	F	V	A	S	R	T	E	G	F	E	E	Y	R	K	I	V	.	.	.	.	.	.	E	G	Y	T	P	E	S	V	E	D	I	T	G	V	S	A	S	E	I	R	Q	A
Template Known Secondary structure		.			T		S							T	T																T	T		S																				.	.	.	.	.	.		T			S	G	G	G
Template Predicted Secondary structure		.																																																				.	.	.	.	.	.
Template SS confidence
			209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		359	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	R	Q	M	A	A	N	R	T	.	Q	I	I	A	G	W	C	V	Q	R	M	Q	H	G	E	Q	W	A	W	M	I	V	V	L	A	A	M	L	G	Q	I	G	L	P	G	G	G	F	G	F	G	W	H	Y	N	G	A	G	T	P	G	R	K	G	V	I	L	S	G	F	S	G	S	T	S	I	P	P	V	H
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		A	R	M	Y	A	Q	A	K	S	A	A	I	L	W	G	M	G	V	T	Q	F	Y	Q	G	V	E	T	V	R	S	L	T	S	L	A	M	L	T	G	N	L	G	K	P	H	A	G	V	N	P	V	R	G	Q	N	N	V	Q	G	A	C	D	M	G	A	L	P	D	T	Y	P	G	Y	Q	Y	V	K	D	P	A
Template Known Secondary structure								S	S	S							T	T	G	G	G	S	S	S															T	T		S	S	S	T	T		S						S	B	T	T							T	T		B	T	T			G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		438	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	S	D	Y	K	G	Y	S	S	T	I	P	I	A	R	F	I	D	A	I	L	E	P	G	K	V	I	N	W	N	G	K	S	V	K	L	P	P	L	K	M	C	I	F	A	G	T	N	P	F	H	R	H	Q	Q	I	N	R	I	I	E	G	L	R	K	L	E	T	V	I	A	I	D	N	Q	W	T	S	T
Query Conservation
Alig confidence																	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.
Template Sequence		N	R	E	K	F	A	K	A	W	G	V	E	S	L	P	.	.	.	.	.	.	A	H	T	G	Y	R	I	S	E	L	P	H	R	A	A	H	G	E	V	R	A	A	Y	I	M	G	E	D	P	L	Q	T	D	A	E	L	S	A	V	R	K	A	F	E	D	L	E	L	V	I	V	Q	D	I	F	M	T	K	T
Template Known Secondary structure										T	T		S				.	.	.	.	.	.		S					G	G	G							T	T	S								S							S	S	S											S	S							S	B
Template Predicted Secondary structure																	.	.	.	.	.	.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	F	A	D	I	V	L	P	A	T	T	Q	F	E	R	N	D	L	D	Q	Y	G	N	H	S	N	R	G	I	I	A	M	K	Q	V	V	P	P	Q	F	E	A	R	N	D	F	D	I	F	R	E	L	C	R	R	F	N	R	E	E	A	F	T	E	G	L	D	E	M	G	W	L	K	R	I	W	Q	E	G
Query Conservation
Alig confidence																			.	.	.																																																									.	.	.	.
Template Conservation																			.	.	.																																																									.	.	.	.
Template Sequence		A	S	A	A	D	V	I	L	P	S	T	S	W	G	E	H	E	.	.	.	G	V	F	T	A	A	D	R	G	F	Q	R	F	F	K	A	V	E	P	K	W	D	L	K	T	D	W	Q	I	I	S	E	I	A	T	R	M	G	Y	P	M	H	Y	N	N	T	Q	E	I	W	D	E	L	R	H	L	.	.	.	.
Template Known Secondary structure				T		S					B			B	T	T	B		.	.	.						T	T	S									S			S	S	S		B													T	T						S	S												.	.	.	.
Template Predicted Secondary structure																			.	.	.																																																									.	.	.	.
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.				.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
		598	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	Q	G	K	G	R	G	V	H	L	P	A	F	D	D	F	W	N	N	K	E	Y	V	E	F	D	H	P	Q	M	F	V	R	H	Q	A	F	R	E	D	P	D	L	E	P	L	G	T	P	S	G	L	I	E	I	Y	S	K	T	I	A	D	M	N	Y	D	D	C	Q	G	H	P	M	W	F	E	K	I	E
Query Conservation
Alig confidence		.	.	.	.	.																										.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																										.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	C	P	D	F	Y	G	A	T	Y	E	K	M	G	E	L	G	F	I	Q	W	P	C	R	D	T	.	.	S	D	A	D	Q	G	T	S	Y	L	F	K	E	K	F	D	T	P	N	G	L	A	Q	F	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	D	W	V	A	P	I	D
Template Known Secondary structure		.	.	.	.	.		T	T	T	T	T							T	T	T					S					S	.	.	S	T	T			B		S	S	S		S	S			S	S	T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S
Template Predicted Secondary structure		.	.	.	.	.																										.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.			.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.															560	.	.	.	.	.	.	.
		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.			.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		R	S	H	G	G	P	G	S	Q	K	Y	P	L	H	L	Q	S	V	H	P	D	.	.	F	R	L	H	S	Q	L	C	E	S	E	T	L	R	Q	Q	Y	T	V	A	G	K	E	P	V	F	I	N	P	Q	D	A	S	A	R	G	I	R	N	G	D	V	V	R	V	F	N	A	R	G	Q	V	L	A	G	A	V
Query Conservation																							.	.
Alig confidence				.	.	.	.	.															.	.																		.	.
Template Conservation				.	.	.	.	.																																		.	.
Template Sequence		K	L	.	.	.	.	.	T	D	E	Y	P	M	V	L	S	T	V	R	E	V	G	H	Y	S	C	R	S	M	T	G	N	C	A	A	L	A	A	L	A	.	.	D	E	P	G	Y	A	Q	I	N	T	E	D	A	K	R	L	G	I	E	D	E	A	L	V	W	V	H	S	R	K	G	K	I	I	T	R	A	Q
Template Known Secondary structure				.	.	.	.	.		S	S	S										T	T			S	S		T	T	G	G	G	S					T	T		.	.		S	S														T			T	T								S	S
Template Predicted Secondary structure				.	.	.	.	.																																		.	.
Template SS confidence
		568	.						570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.			.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
		756	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	D	R	Y	A	P	G	V	A	R	I	H	E	G	A	W	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	D	R	P	N	K	G	A	I	Y	M	T	Y	Q	W	W	P	E
Template Known Secondary structure				S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.