Job Description P33225 Confidence 20.18% Date Thu Jan 5 11:51:24 GMT 2012 Rank 182 Aligned Residues 142 % Identity 13% Template c1yi1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetolactate synthase; PDBTitle: crystal structure of arabidopsis thaliana acetohydroxyacid synthase in2 complex with a sulfonylurea herbicide, tribenuron methyl Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	A	L	D	M	F	Y	E	E	L	E	R	V	Q	K	T	H	G	P	S	A	L	L	T	A	S	G	W	Q	S	T	G	M	F	H	N	A	S	G	M	L	A	K	A	I	A	L	H	G	N	S	V	G	T	G	G	D	Y	S	T	G	A	A	Q	V	I	L	P	R	V	V	G	S	M	E	V	Y	E	Q
Query Conservation
Alig confidence															.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template Sequence		D	S	H	L	E	Q	I	V	R	L	I	S	E	.	.	.	.	.	.	S	K	K	P	V	L	Y	V	G	G	G	C	L	N	S	S	D	E	L	G	R	F	V	E	L	T	G	I	P	V	A	S	T	L	M	G	L	G	S	Y	P	D	D	.	.	.	.	.	.	.	E	L	S	L	H	M	L	G	M	H	G
Template Known Secondary structure														T	.	.	.	.	.	.		S	S							G	G	G	T	T																				T	T	T	T	T	S					.	.	.	.	.	.	.	T	T						S	T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.																																												.	.	.	.	.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.							.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.								.	.	.	.	.	.	.	.	350	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	S	W	P	L	V	L	Q	N	S	K	T	I	V	L	W	G	S	D	L	L	K	N	Q	Q	A	N	W	W	C	P	D	H	D	V	Y	E	Y	Y	A	Q	L	K	A	K	V	A	A	G	E	I	E	V	I	S	I	D	P	V	V	T	S	T	H	E	Y	L	G	R	E	H	V	K	H	I	A	V	N	P
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.												.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.												.
Template Sequence		T	V	Y	A	N	Y	A	V	E	H	S	D	L	L	L	A	F	G	V	R	F	D	D	R	V	T	G	K	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	A	S	R	A	K	I	V	H	I	D	I	D	S	A	E	I	.	.	.	.	G	K	N	K	T	P	H	V	S	V	C	.
Template Known Secondary structure											T		S						S									S	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	T	T	S							S		G	G	G	T	.	.	.	.	T	S	S	S			S					.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.												.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.																	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.					.	.	.	.	.	.	.	.	410	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	D	V	P	L	Q	L	A	L	A	H	T	L	Y	S	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	D	V	K	L	A	L	Q	G	M	N	K	V	L	E	N
Template Known Secondary structure		.	S
Template Predicted Secondary structure		.
Template SS confidence
			413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions