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Job DescriptionP33225
Confidence100.00%DateThu Jan 5 11:51:24 GMT 2012
Rank4Aligned Residues757
% Identity27%Templatec1vlfQ_
PDB info PDB header:oxidoreductaseChain: Q: PDB Molecule:pyrogallol hydroxytransferase large subunit; PDBTitle: crystal structure of pyrogallol-phloroglucinol2 transhydroxylase from pelobacter acidigallici complexed3 with inhibitor 1,2,4,5-tetrahydroxy-benzene
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   52.......60.........70.........80. ........90.........100.........
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Query Sequence  GILTGSHWGAIRATVKDGRFVAAKPFELDK. . . . . . . . . . . . . . . . . . . . . . YPSKMIAGLPDHVHNAARIRYPMVRVDW
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Template Sequence  RLTNSSTGGPVFVYVKDGKIIRMTPMDFDDAVDAPSWKIEARGKTFTPPRKTSIAPYTAGFKSMIYSDLRIPYPMKRKSF
Template Known Secondary structure 

TT

TT

B

TTTS




TT


SB



TTT
TTB

S
TT
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   110....... ..120.........130.........140.........150.........160. ........170.........180.
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Query Sequence  LRKRHLSD. . . . . . . TSQRGDNRFVRVSWDEALDMFYEELERVQKTHGPSALLTASGWQ. STGMFHNASGMLAKAIALHG
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Template Sequence  DPNGERNPQLRGAGLSKQDPWSDYERISWDEATDIVVAEINRIKHAYGPSAILSTPSSHHMWGNVGYRHSTYFRFMNMMG
Template Known Secondary structure 
TTS


GGGTTTT
GGGG

T
GGG

S


S
TTTSTTT
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   182.......190.........200.........210..... ....220.........230.........240.........250........
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Query Sequence  NSVGTGGDYSTGAAQVILPRVVGSMEVYEQQTSW. . . PLVLQNSKTIVLWGSDLLKNQQANWWCPDHDVYEYYAQLKAKV
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Template Sequence  FTYADHNPDSWEGWHWGGMHMWGFSWRLGNPEQYDLLEDGLKHAEMIVFWSSDPETNSGIYAGFES. . . . . . . NIRRQWL
Template Known Secondary structure 



GGGT

GGGTT



TT
SS


SSS
TTTT.......
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   166...170.........180.........190.........200.........210.........220.........230. .......
 
   259260.........270.........280.. .......290.........300.........310.........320.........330.......
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Query Sequence  AAGEIEVISIDPVVTSTHEYLGRE. HVKHIAVNPQTDVPLQLALAHTLYSENLYDKNFLANYCVGFEQFLPYLLGEKDGQ
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Template Sequence  KDLGVDFVFIDPHMNHT. . . . ARLVADKWFSPKIGTDHALSFAIAYTWLKEDSYDKEYVAANAHGFEEWADYVLGKTDGT
Template Known Secondary structure  TT

SB

....
S


TT
T
S
STTTTTS
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   239240.........250..... ....260.........270.........280.........290.........300.........310....
 
   338.340.........350.........360.........370... ......380.........390.........400.........410..
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Query Sequence  PKDAAWAEKLTGIDAETIRGLARQMAANRTQIIAGW. . . . . CVQRMQHGEQWAWMIVVLAAMLGQIGLPGGGFGFGWHYN
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Template Sequence  PKTCEWAEEESGVPACEIRALARQWAKKNTYLAAGGLGGWGGACRASHGIEWARGMIALATMQGMGKPGSNMWSTTQGVP
Template Known Secondary structure 



S
S
TTTTS

GGGSBTTTTTTSTT


SSS


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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   413......420.........430.........440...... ...450.........460 .
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Query Sequence  GAGTPGRKGVILSGFSGSTSIPPVHDNSDYKGYS. . . . . . . . . . . . . . . . STIPIARFIDAILE. . . . . . . . . . . . . . . P
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Template Conservation                                                                                  
Template Sequence  LDYEFYFPGYAEGGISGDCENSAAGFKFAWRMFDGKTTFPSPSNLNTSAGQHIPRLKIPECIMGGKFQWSGKGFAGGDIS
Template Known Secondary structure 

TTS



GGG
TTS

TTTSSGGGT

SSS





SSSSTTS
GGGS


SS

SSGG
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   395....400.........410.........420.........430.........440.........450.........460.........470....
 
   462.......470.........480.........490.........500. ........510.........520.........530......
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Query Sequence  GKVINWNGKSVKLPPLKMCIFAGTNPFHRHQQINRIIEGL. . RKLETVIAIDNQWTSTCRFADIVLPATTQFERNDL. . .
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Template Sequence  HQLHQYEYPAPGYSKIKMFWKYGGPHLGTMTATNRYAKMYTHDSLEFVVSQSIWFEGEVPFADIILPACTNFERWDISEF
Template Known Secondary structure  GGG
S
TT




S

SSSTTT
TT

SBS
TTGGG
SB

GGGS
T
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   475....480.........490.........500.........510.........520.........530.........540.........550....
 
   537..540.........550.........560.........570.........580.........590.........600........
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Query Sequence  . . . . . . . . DQYGNHSNRGIIAMKQVVPPQFEARNDFDIFRELCRRFNREEAFTEGLDEMGWLKRIWQEGVQQGKGRGVHL
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Template Sequence  ANCSGYIPDNYQLCNHRVISLQAKCIEPVGESMSDYEIYRLFAKKLNIEEMFSEGKDELAWCEQYFN. . . . . . ATDMPKY
Template Known Secondary structure  T

BTTBTTGGGGSSS



S

STT
B
TT
TT

......TSSGGGT
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   555....560.........570.........580.........590.........600.........610.........620. .......
 
   609610.........620....... ..630.........640.........650.........660... ...
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Query Sequence  PAFDDFWNNKEYVEFDHPQ. . . . . . . . . . . . . . . . . MFVRHQAFREDPDLEPLGTPSGLIEIYSKTIADMNY. . . . . DDC
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Template Sequence  MTWDEFFKKGYFVVPDNPNRKKTVALRWFAEGREKDTPDWGPRLNNQVCRKGLQTTTGKVEFIATSLKNFEEQGYIDEHR
Template Known Secondary structure 






TTS



TTTTSB

SS


S
GGGSBTTBS
SSTTSSSB
TT


TTS
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   629630.........640.........650.........660.........670.........680.........690.........700........
 
   667..670.........680.........690.........700.........710........ .720.........730.........
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Query Sequence  QGHPMWFEKIERSHGGPGSQKYPLHLQSVHPDFRLHSQLCESETLRQQYTVA. . . . . . . GKEPVFINPQDASARGIRNGD
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Template Sequence  PSMHTYVPAWESQKHSPLAVKYPLGMLSPHPRFSMHTMGDGKNSYMNYIKDHRVEVDGYKYWIMRVNSIDAEARGIKNGD
Template Known Secondary structure 
SB





TTSTTT
GGGGT





TTSBTTBSSSTT
GGGGSTTTTTTT

TT
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   709710.........720.........730.........740.........750.........760.........770.........780........
 
   740.........750.........760.........770.........780.........790.........800.........810.........
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Query Sequence  VVRVFNARGQVLAGAVVSDRYAPGVARIHEGAWYDPDKGGEPGALCKYGNPNVLTIDIGTSQLAQATSAHTTLVEIEKYN
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Template Sequence  LIRAYNDRGSVILAAQVTECLQPGTVHSYESCAVYDPLGTAGKSADRGGCINILTPDRYISKYACGMANNTALVEIEKWD
Template Known Secondary structure  TTSSB
TT

S





BSSSTTTS
BSS

GGGSS

S
SSSS




BT


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   789790.........800.........810.........820.........830.........840.........850.........860........
 
   820.....
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Query Sequence  GTVEQV
Query Conservation        
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Template Conservation        
Template Sequence  GDKYEI
Template Known Secondary structure  S




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   869870....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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