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Job DescriptionP75957
Confidence100.00%DateThu Jan 5 12:16:25 GMT 2012
Rank42Aligned Residues212
% Identity24%Templatec3gd7C_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELR
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Template Sequence  MTVKDLTAKYTEG. . GNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLL. NTEGEIQIDGVSWDSITLEQW. . . .
Template Known Secondary structure  SSTT..S

TT

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   1210.........1220.. .......1230.........1240.........1250.........1260. ........1270.........1280..
 
   86...90.........100.........110.........120. ........130.........140.........150.........160.
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Query Sequence  NQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAE. . . . INSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALV
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Template Sequence  RKAFGVIPQKVFIFSG. TFRKNLDPNAAHSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVL
Template Known Secondary structure  GGGS





SS.B
TTS
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TTTT
TTTGGGSTTGGG
B

TTTTTS
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   162.......170.........180.........190.........200.........210.... .....220........
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Query Sequence  NNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSR. QLEMRDGRLTAELS
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Template Sequence  SKAKILLLDEPSAHLDPVTYQIIRRTL. . . KQAFADCTVILCEARIEAMLECDQFLVIEENKVRQYDS
Template Known Secondary structure  TT

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   1362.......1370.........1380........ .1390.........1400.........1410.........1420......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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