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Job DescriptionP75957
Confidence96.88%DateThu Jan 5 12:16:25 GMT 2012
Rank184Aligned Residues106
% Identity20%Templatec3b9pA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cg5977-pa, isoform a; PDBTitle: spastin
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
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Query Sequence  GEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPL
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Template Sequence  APAKGLLLFGPPGNGKTLLARAVATECSAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   514.....520.........530.........540...
 
   113......120.........130.........140.........150.........160.........170...... ...180.........190
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Query Sequence  LIGKKKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNL. . DARNADSIFQLLGE
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Template Sequence  . . . . . . . . . . . . . . . . . . . FLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSEREASRRLKTEFLVE
Template Known Secondary structure  ...................STTTSSSS
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STGGGTSB



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   544.....550.........560.........570.........580.........590.........600....
 
   191........200.......
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Query Sequence  LNRLQGTAFLVVTHDLQ
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Template Sequence  FDGLPRIVVLAATNRPQ
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GG
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   610.........620......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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