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Job DescriptionP75957
Confidence99.74%DateThu Jan 5 12:16:25 GMT 2012
Rank64Aligned Residues188
% Identity12%Templatec3a4mB_
PDB info PDB header:transferaseChain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100.........110......
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Query Sequence  MMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGK
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Template Sequence  LIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDS. . ALKNYWVIVDDTNYY
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   6...10.........20.........30.........40.........50.........60........ .70.........80...
 
   117..120.........130.........140.........150... ......160.........170.........180.......
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Query Sequence  KKPAEINSRALEMLKAVGLDHRANHRPSELSGGERQR. . . . . . . . . VAIARALVNNPRLVLADEPTGNLDARNADSIFQL
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Template Sequence  NSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKDIDFNEI
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   188.190.........200.........210...... ...220........
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Query Sequence  LGELNRLQGTAFLVVTHDLQLAKRMSRQL. . . EMRDGRLTAELS
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Template Sequence  AKKLIEK. . SKEIPKFNISDKIDKETRKIVSEYIKSKKLDKDKI
Template Known Secondary structure  ..TS




TT

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   164.....170 .........180.........190.........200.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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