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Job DescriptionP75957
Confidence97.31%DateThu Jan 5 12:16:25 GMT 2012
Rank145Aligned Residues151
% Identity19%Templatec2dflA_
PDB info PDB header:recombinationChain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  VGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMP
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Template Sequence  IETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KGGLSGK
Template Known Secondary structure  B
TTSSTTSSTTSSS
GG........................................GTS
S
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   104.....110.........120.........130...... ...140...
 
   112.......120.........130...... ...140.........150.........160.........170...
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Query Sequence  LLIGKKKPAEINSRALEMLKAVGLD. . . . . . . . HRANHRPSELSGGERQRVAIARALVNNPRLVLADEPT. . . . . . . . . .
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Template Sequence  AVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIRAINTDHQIAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGR
Template Known Secondary structure  SSS


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   144.....150.........160.........170.........180.........190.........200.........210.........220...
 
   174.....180.. .......190.........200.........210.... .....220..
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Query Sequence  GNLDARNAD. . SIFQLLGELNRLQGTAFLVVTHDLQLAKRMSR. QLEMRDGR
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Template Sequence  ENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQVMHTLYHVPGIRIQLKKSR
Template Known Secondary structure  TSTTTTT






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   224.....230.........240.........250.........260.........270.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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