Return to main results Retrieve Phyre Job Id

Job DescriptionP75957
Confidence100.00%DateThu Jan 5 12:16:25 GMT 2012
Rank38Aligned Residues203
% Identity25%Templatec2cbzA_
PDB info PDB header:transportChain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1
Resolution1.5 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  LQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELR
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Template Sequence  ITVRNATFTWARS. . DPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVAIKG. . . . . . . . . . . . . . .
Template Known Secondary structure  S
TT..S

S
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STTSSTT
S
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   644.....650...... ...660.........670.........680.........690.........700......
 
   86...90.........100.........110.........120.........130..... ....140.........150.........160.
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Query Sequence  NQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAVGL. . . . DHRANHRPSELSGGERQRVAIARALV
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Template Sequence  . . SVAYVPQQAWIQND. SLRENILFGCQLEEPYYRSVIQACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVY
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SS



S.TTS


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TTSTTGGGSSTTSB


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   707..710.........720 .........730.........740.........750.........760.........770.........780...
 
   162.......170.........180.........190.. .......200.........210.........220........
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Query Sequence  NNPRLVLADEPTGNLDARNADSIFQLLGELN. RLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS
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Template Sequence  SNADIYLFDDPLSAVDAHVGKHIFENVIGPKGMLKNKTRILVTHSMSYLPQVDVIIVMSGGKISEMGS
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SSTTTTS
TTSTTSTTTTS
S
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   784.....790.........800.........810.........820.........830.........840.........850.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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