Job Description P75957 Confidence 98.00% Date Thu Jan 5 12:16:25 GMT 2012 Rank 105 Aligned Residues 152 % Identity 20% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		V	G	E	G	E	M	M	A	I	V	G	S	S	G	S	G	K	S	T	L	L	H	L	L	G	.	.	.	.	.	.	G	L	D	T	P	T	S	G	D	V	I	F	N	G	Q	P	M	S	K	L	S	S	A	A	K	A	E	L	R	N	Q	K	L	G	F	I	Y	Q	F	H	H	L	L	P	D	F	T	A	L
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	Q	R	.	.	.	.	.	.	.	.	.	.	F	G	L	D	P	D	D	A	L
Template Known Secondary structure				S	S	S							S	T	T	S	S												T	T	S		T	T	T	T			S	S							S	S	S				G	G	G	G							.	.	.	.	.	.	.	.	.	.	T								G
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.											.	.	.	.	240	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		E	N	V	A	M	P	L	L	I	G	K	K	K	P	A	E	I	N	S	R	A	L	E	M	L	K	A	V	G	L	D	H	R	A	N	H	R	P	S	E	L	S	G	G	E	R	Q	R	V	A	I	A	R	A	L	V	N	N	P	R	L	V	L	A	D	E	P	T	G	N	L	D	A	R	N	A	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H
Template Known Secondary structure		G	G								S	T	T									T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T	G	G	G			T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.																														.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
			182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.
Predicted Secondary structure		.																										.									.
Query SS confidence		.																										.									.
Query Sequence		.	D	S	I	F	Q	L	L	G	E	L	N	R	L	Q	G	T	A	F	L	V	V	T	H	D	L	.	Q	L	A	K	R	M	S	R	.	Q	L	E	M	R	D	G	R
Query Conservation		.																										.									.
Alig confidence		.																										.									.
Template Conservation
Template Sequence		L	A	K	F	M	R	A	L	Q	R	L	A	D	Q	F	G	V	A	V	V	V	T	N	Q	V	G	G	N	I	M	A	H	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																																				S									S
Template Predicted Secondary structure
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions