Job Description P0AEY8 Confidence 100.00% Date Wed Jan 25 15:20:32 GMT 2012 Rank 4 Aligned Residues 392 % Identity 10% Template d1pv7a_ SCOP info MFS general substrate transporter MFS general substrate transporter LacY-like proton/sugar symporter Resolution 3.60

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		R	L	G	R	Q	A	L	L	F	P	L	C	L	V	L	Y	E	F	S	T	Y	I	G	N	D	M	I	Q	P	G	M	L	A	.	V	V	E	Q	Y	Q	A	G	I	D	W	V	P	T	S	M	T	A	Y	L	A	G	G	M	F	L	Q	W	L	L	G	P	L	S	D	R	I	G	R	R	P	V	M	L	A	G
Query Conservation																																			.
Alig confidence										.	.	.																							.
Template Conservation										.	.	.
Template Sequence		Y	L	K	N	T	N	F	W	.	.	.	M	F	G	L	F	F	F	F	Y	F	F	I	M	G	A	Y	F	P	F	F	P	I	W	L	H	D	I	N	H	I	S	K	S	D	T	G	I	I	F	A	A	I	S	L	F	S	L	L	F	Q	P	L	F	G	L	L	S	D	K	L	G	L	R	K	Y	L	L	W	I
Template Known Secondary structure					S					.	.	.																																																	T												T	T		T
Template Predicted Secondary structure										.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		V	V	W	F	I	V	T	C	L	A	I	L	L	A	Q	N	I	E	Q	F	T	L	L	R	F	L	Q	G	I	S	L	C	F	I	G	A	V	G	Y	A	A	I	Q	E	S	F	E	E	.	.	.	.	.	.	A	V	C	I	K	I	T	A	L	M	A	N	V	A	L	I	A	P	L	L	G	P	L	V	G	A
Query Conservation																																																		.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	G	M	L	V	M	F	A	P	F	F	I	F	I	F	G	P	L	L	Q	Y	N	I	L	V	G	S	I	V	G	G	I	Y	L	G	F	C	F	N	A	G	A	P	A	V	E	A	F	I	E	K	V	S	R	R	S	N	F	E	F	G	R	A	R	M	F	G	C	V	G	W	A	L	G	A	S	I	V	G
Template Known Secondary structure								T								T							T	T								T	T	T	T	G	G	G	G	G	T	T																	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.								.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.
Query Sequence		A	W	I	H	V	L	P	W	E	G	M	F	V	L	F	A	A	L	A	A	I	S	F	F	G	L	Q	R	A	M	P	E	T	A	T	R	I	G	E	K	L	S	L	K	E	L	G	R	D	Y	K	L	.	.	.	.	.	.	.	V	L	K	N	G	R	F	V	A	G	A	L	A	L	G	F	V	S	L	P	L
Query Conservation																																																						.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	M	F	T	I	N	N	Q	F	V	F	W	L	G	S	G	C	A	L	I	L	A	V	L	L	F	F	A	K	T	D	A	P	S	S	A	T	V	A	N	A	V	G	A	N	H	S	A	F	S	L	K	L	A	L	E	L	F	R	Q	P	K	L	W	F	L	S	L	Y	V	I	G	V	S	C	T	Y	D	V	F
Template Known Secondary structure																												S	S				S		S	S	S		S	S					S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	W	I	A	Q	S	P	I	I	I	I	T	G	E	Q	L	S	S	Y	E	Y	G	L	L	Q	V	P	I	F	G	A	L	I	A	G	N	L	L	L	A	R	L	T	S	R	R	T	V	R	S	L	I	I	M	G	G	W	P	I	M	I	G	L	L	V	A	A	A	A	T	V	I	S	S	H	A	Y	L	W
Query Conservation
Alig confidence																																																																							.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		D	Q	Q	F	A	N	F	F	T	S	F	F	A	T	G	E	Q	G	T	R	V	F	G	Y	V	T	T	M	G	E	L	L	N	A	S	I	M	F	F	A	P	L	I	I	N	R	I	G	G	K	N	A	L	L	L	A	G	T	I	M	S	V	R	I	I	G	S	S	F	.	.	.	.	.	A	T	S	A	L	E
Template Known Secondary structure										T	T	S	S	S																									T	T																														T	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.						.	310	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																														.										.
Query SS confidence																														.										.
Query Sequence		M	T	A	G	L	S	I	Y	A	F	G	I	G	L	A	N	A	G	L	V	R	L	T	L	F	A	S	D	.	M	S	K	G	T	V	S	A	A	.	M	G	M	L	Q	M	L	I	F	T	V	G	I	E	I	S	K	H	A	W	L	N	G	G	N	G	L	F	N	L	F	N	L	V	N	G	I	L	W	L	S
Query Conservation																														.										.
Alig confidence																														.										.
Template Conservation
Template Sequence		V	V	I	L	K	T	L	H	M	F	E	V	P	F	L	L	V	G	C	F	K	Y	I	T	S	Q	F	E	V	R	F	S	A	T	I	Y	L	V	C	F	C	F	F	K	Q	L	A	M	I	F	M	S	V	L	A	G	N	M	Y	E	S	I	G	F	Q	G	A	Y	L	V	L	G	L	V	A	L	G	F	T	L
Template Known Secondary structure																												S		G	G	G										T	T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	V	I	F	L	K	D	K	Q	M	G	N	S	H	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	V	F	T	L	S	G	P	G	P	L	S	L	L	R
Template Known Secondary structure							S			S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions