 |
Job Description | P0CF29 | Confidence | 4.84% | Date | Thu Jan 5 11:30:51 GMT 2012 |
Rank | 50 | Aligned Residues | 70 |
% Identity | 11% | Template | d2c5wb1 |
SCOP info | beta-lactamase/transpeptidase-like
| beta-lactamase/transpeptidase-like
| beta-Lactamase/D-ala carboxypeptidase
|
Resolution | 2.55 |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | R | W | P | Q | H | D | F | T | S | L | K | K | L | R | P | . |
Q | S | V | T | S | R | I | Q | P | G | S | D | V | I | V | C | A | E | M | D | . |
. |
. |
E | Q | W | G | Y | V | G | A | K | S | R | Q | R | . |
. |
. |
. |
. |
. |
. |
W | L | F | Y | A | Y | D | S | L | R | K | T | V | V | A | H | V | F | G |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
| . | . | . |
|
|
|
|
|
|
|
|
|   |
|   |   | . | . | . | . | . | . | . |
|
|
|   |
|   |
|   |   |
|   |   |
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |   |
|
|   |
|
|
|   |
|   |   |
Template Sequence |   |
Y | P | A | Y | M | D | N | Y | L | K | E | V | I | N | Q | V | E | E | E | T | G | Y | N | L | L | T | T | G | M | D | V | Y | T | N | V | D | Q | E | A | Q | K | H | L | W | D | I | Y | N | T | D | E | Y | V | A | Y | P | D | D | E | L | Q | V | A | S | T | I | V | D | V | S | N | G | K | V | I | A | Q | L | G | A |
Template Known Secondary structure |   |
S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T | T | S |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|
| S |
| S | S |
|  |  |  |  |  |  |  |  | T | T | T |
| B |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . |
  |
  |   |
77 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
E |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
R |
Template Known Secondary structure |   |
S |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
348 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|