Job Description P0CF29 Confidence 69.09% Date Thu Jan 5 11:30:51 GMT 2012 Rank 14 Aligned Residues 108 % Identity 13% Template d1bcoa2 SCOP info Ribonuclease H-like motif Ribonuclease H-like mu transposase, core domain Resolution 2.40

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																											.	.														.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.														.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	R	W	L	F	Y	A	Y	D	S	L	R	K	T	V	V	A	H	V	F	G	E	R	T	M	.	.	A	T	L	G	R	L	M	S	L	L	S	P	F	.	.	.	D	V	V	I	W	M	T	D	G	W	P	L	Y	E	S	R	L	K	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.														.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.														.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	K	T	W	F	W	Q	D	V	K	T	R	K	I	L	G	W	R	C	D	V	S	E	N	I	D	S	I	R	L	S	F	M	D	V	V	T	R	Y	G	I	P	E	D	F	H	I	T	I	D	N	T	R	G	A	A	N	K	W	L	T	G	G	A	P	N	R	Y	R	F	K	V	K	E	D	D	P	K	G
Template Known Secondary structure											T	T	T										S	S																					S	S								T	T	S	T	T	T	T	T	T	S				T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
																114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.												.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	V	I	S	K	R	Y	T	Q	R	I	E	R	H	N	L	N	L	R	Q	H	L	A	R	L	G	R	K	S	L	S	F	S	K	.	.	.	.	.	.	.	.	.	.	.	S	V	E	L	H	D	K	V	I	G	H	Y	L	N	I	K	H	Y	Q
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.															.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																			.	.																																								.	.
Template Sequence		L	F	L	L	M	G	A	K	M	H	W	T	S	V	V	A	G	K	G	W	G	Q	A	K	P	V	E	R	A	F	G	V	G	.	.	G	L	E	E	Y	V	D	K	H	P	A	L	A	G	A	Y	T	G	P	Y	G	D	R	A	V	D	A	E	L	F	L	K	T	L	A	E	G	V	A	.	.	M	F	N
Template Known Secondary structure							T						S	S	S		T	T						S	S		S	S	G	G	G	S	G	G	.	.	G	G	G	G	T	T	T	T		G	G	G	T	T	T	B					T	T	T																	.	.
Template Predicted Secondary structure																																			.	.																																								.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.			.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.			.	.	440

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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