Job Description P0CF29 Confidence 2.69% Date Thu Jan 5 11:30:51 GMT 2012 Rank 97 Aligned Residues 58 % Identity 17% Template c3ns4A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:vacuolar protein sorting-associated protein 53; PDBTitle: structure of a c-terminal fragment of its vps53 subunit suggests2 similarity of garp to a family of tethering complexes Resolution 2.90 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		F	G	E	R	T	M	A	T	L	G	R	L	M	S	L	L	S	P	.	.	F	D	V	V	I	W	M	T	D	G	W	P	L	Y	E	S	R	L	K	G	K	L	H	V	I	S	K	R	Y	T	Q	R	I	E	R	H	N	L	N	L	R	Q	H	L	A	R	L	G	R
Query Conservation																				.	.
Alig confidence																				.	.						.	.	.	.	.										.	.	.	.
Template Conservation																											.	.	.	.	.										.	.	.	.
Template Sequence		T	N	N	N	P	D	S	A	V	W	S	F	V	L	A	L	K	G	I	P	W	D	L	A	L	.	.	.	.	.	W	K	K	X	W	S	A	Y	N	.	.	.	.	L	E	T	N	R	D	L	F	I	F	K	W	D	K	V	L	L	G	Q	F	E	N	N	L	A	R
Template Known Secondary structure		T	T	S															T			S					.	.	.	.	.										.	.	.	.								G	G	G	G	G														T
Template Predicted Secondary structure																											.	.	.	.	.										.	.	.	.
Template SS confidence
		694	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.						.	720	.	.	.	.	.	.	.					.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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