Job Description P0CF29 Confidence 3.48% Date Thu Jan 5 11:30:51 GMT 2012 Rank 72 Aligned Residues 41 % Identity 7% Template c1nh2D_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcription initiation factor iia small chain; PDBTitle: crystal structure of a yeast tfiia/tbp/dna complex Resolution 1.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	H	D	F	T	S	L	K	K	L	R	P	Q	S	V	T	S	R	I	Q	P	G	S	D	V	I	V	C	A	E	M	D	E	Q	W	G	Y	V	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	T	F	D	K	V	V	A	E	T	L	K	D	N	T	Q	S	K	L	T	V	K	G	N	L	D	T	Y	G	F	C	D	D	V	W	T	F	I	V	K
Template Known Secondary structure																S																		T	T
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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