 |
| Job Description | P0AE24 | | Confidence | 9.99% | Date | Thu Jan 5 11:22:19 GMT 2012 |
| Rank | 22 | Aligned Residues | 22 |
| % Identity | 23% | Template | c3mmyF_ |
| PDB info |
PDB header:nuclear protein | Chain: F: PDB Molecule:nuclear pore complex protein nup98; |
PDBTitle: structural and functional analysis of the interaction between the2 nucleoporin nup98 and the mrna export factor rae1
|
| Resolution | 1.65 Å |
|
| | |
445 | . | . | . | . | 450 | . | . | . | . | . | . | . | |
. | . | 460 | . | . | . | . | . | . |
| Predicted Secondary structure | |
 |
|
|
|
|
|
|
|
| | | | | . | | | | | |
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | I | P | E | T | K | N | V | T | L | E | H | I | . |
E | R | K | L | M | A | G | E | K |
| Query Conservation | |
| |
|
|
|
|
| | |
| |
|
| . | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | |
| | | |
| |
|
|
|
| | |
|
| | |
|
|
|
| Template Sequence | |
A | M | K | E | Y | E | S | K | S | L | E | E | L | R | L | E | D | Y | Q | A | N | R | K |
| Template Known Secondary structure | |
G | S | T | T | T | T | T | S |
| | | | | | | | | | | T | T |
|
|
| Template Predicted Secondary structure | |
 |
| | | |
|
|
|
| | | | | | | | | | |
|
|
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
