Job Description P0ABM1 Confidence 1.27% Date Thu Jan 5 11:15:49 GMT 2012 Rank 96 Aligned Residues 119 % Identity 15% Template d2j8cm1 SCOP info Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Resolution 1.87

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		H	Q	L	A	I	P	P	R	L	Y	Q	I	C	G	W	F	I	P	W	L	A	I	A	S	V	V	V	L	T	V	G	W	I	W	G	F	G	F	.	A	P	A	D	Y	Q	Q	G	N	S	Y	R	I	I	Y	L	H	V	P	A	A	I	W	S	M	G	I	Y	A	S	M	A	V	A	A	F	I	G	L	V	W
Query Conservation																																								.
Alig confidence																																								.															.
Template Conservation																																																							.
Template Sequence		W	A	F	L	S	A	I	W	L	W	M	V	L	G	F	I	R	P	I	L	M	G	S	W	S	E	A	V	P	Y	G	I	F	S	H	L	D	W	T	N	N	F	S	L	V	H	G	N	L	F	Y	N	P	.	F	H	G	L	S	I	A	F	L	Y	G	S	A	L	L	F	A	M	H	G	A	T	I	L	A	V
Template Known Secondary structure																T							T		G	G	G	S			B	S															T	T		G	G	G			.																										T
Template Predicted Secondary structure																																																							.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		85	.	.	.	.	90	.																												.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		Q	M	K	M	A	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	A	A	M	A	P	I	G	A	V	F	T	F	I	A	L	V	T	G	S	A	W	G	K	P	M	.	.	.	W	G	T	W	W	V	W
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		S	R	F	G	G	E	R	E	L	E	Q	I	A	D	R	G	T	A	A	E	R	A	A	L	F	W	R	W	T	M	G	F	N	A	T	M	E	G	I	H	R	W	A	I	W	M	A	V	L	V	T	L	T	G	G	I	G	I	L	L	S	G	T	V	V	D	N	W	Y	V	W
Template Known Secondary structure		G	G	G	T	T	T								S																	S					T	T																							T	B	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions