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Job Description | P0ABM1 | Confidence | 1.50% | Date | Thu Jan 5 11:15:49 GMT 2012 |
Rank | 70 | Aligned Residues | 121 |
% Identity | 18% | Template | d1ppjc2 |
SCOP info | Heme-binding four-helical bundle
| Transmembrane di-heme cytochromes
| Cytochrome b of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
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Resolution | 2.10 |
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25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | A | I | A | S | V | V | V | L | T | V | G | W | I | W | G | F | G | F | A | P | A | D | Y | Q | Q | G | N | S | Y | R | I | I | . |
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Y | L | H | V | P | A | A | I | W | S | M | G | I | Y | A | S | M | A | V | A | A | F | I | G | L | V | W | Q | M | K | M | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | G | I | C | L | I | L | Q | I | L | T | G | L | F | L | A | M | H | Y | T | S | D | T | T | T | A | F | S | S | V | T | H | I | C | R | D | V | N | Y | G | W | I | I | R | Y | M | H | A | N | G | A | S | M | F | F | I | C | L | Y | M | H | V | G | R | G | L | Y | Y | G | S | Y | T | F | L | E | T | W | N | I | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
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89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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A | N | L | A | V | A | A | M | A | P | I | G | A | V | F | T | F | I | A | L | V | T | G | S | A | W | G | K | P | M | W | G | T | W | W | V | W | D | A | R | L | T | S | E | L | V | L | L | F | L | Y | V | G | V | I | A | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | I | L | L | L | T | V | M | A | T | A | F | M | G | Y | V | L | P | W | G | Q | M | S | F | W | G | A | T | V | I | T | N | L | L | S | A | I | P | Y | I | G | T | N | L | V | E | W | I | W | G | G | F | S | V | D | K | A | T | L | T | R | F | F | A | F | H | F | I | L | P | F | I | I | M | A |
Template Known Secondary structure |   |
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| B |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | G | S | T | T | T |  |  |  |  |  |  |  |  |  | T | S | S | S | S |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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