Job Description P0ABM1 Confidence 9.14% Date Thu Jan 5 11:15:49 GMT 2012 Rank 4 Aligned Residues 155 % Identity 15% Template c3mk7K_ PDB info PDB header:oxidoreductase Chain: K: PDB Molecule:cytochrome c oxidase, cbb3-type, subunit n; PDBTitle: the structure of cbb3 cytochrome oxidase Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.					.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																										.	.	.	.												.	.	.	.
Query SS confidence																										.	.	.	.												.	.	.	.
Query Sequence		W	F	I	P	W	L	A	I	A	S	V	V	V	L	T	V	G	W	I	W	G	F	G	F	.	.	.	.	A	P	A	D	Y	Q	Q	G	N	S	Y	.	.	.	.	R	I	I	Y	L	H	V	P	A	A	I	W	S	M	G	I	Y	A	S	M	A	V	A	A	F	I	G	L	V	W	Q	M	K	M	A	N	L
Query Conservation																										.	.	.	.												.	.	.	.
Alig confidence																										.	.	.	.												.	.	.	.																							.	.
Template Conservation																																																																			.	.
Template Sequence		K	V	V	R	Q	F	A	I	M	T	V	V	W	G	I	V	G	M	G	L	G	V	F	I	A	A	Q	L	A	W	P	F	L	N	F	D	L	P	W	T	S	F	G	R	L	R	P	L	H	T	N	A	V	I	F	A	F	G	G	C	A	L	F	A	T	.	.	S	Y	Y	S	V	Q	R	T	C	Q	T	T	L
Template Known Secondary structure																																G	G	G	G	T	T		T	T	T	S														T	T										.	.										T	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		A	V	A	A	M	A	P	I	G	A	V	F	T	F	I	A	L	V	T	G	S	A	.	.	.	W	G	K	P	M	W	G	T	W	W	V	W	D	A	R	L	T	S	E	L	V	L	L	F	L	Y	V	G	V	I	A	L	W	H	A	F	D	D	R	R	L	A	G	R	A	A	G	I	L	V	L	I	G	V	V
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		F	A	P	K	L	A	A	F	T	F	W	G	W	Q	L	V	I	L	L	A	A	I	S	L	P	L	G	F	T	S	S	K	E	Y	A	E	L	E	W	P	I	D	I	L	I	T	I	V	W	V	A	Y	A	V	V	F	F	G	T	L	A	K	R	K	V	K	H	I	Y	V	G	N	W	F	F	G	A	F	I	L
Template Known Secondary structure		S	S																						T	T	T	T		B				T	T			B																									T		S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	P	I	I	H	Y	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	V	A	I	L	H	V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions