Job Description P0ABM1 Confidence 3.47% Date Thu Jan 5 11:15:49 GMT 2012 Rank 12 Aligned Residues 211 % Identity 13% Template c2nq2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. Resolution 2.40 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																											.																																				.
Query SS confidence																											.																																				.
Query Sequence		G	W	F	I	P	W	L	A	I	A	S	V	V	V	L	T	V	G	W	I	W	G	F	G	F	.	A	P	A	D	Y	Q	Q	G	N	S	Y	R	I	I	Y	L	H	V	P	A	A	I	W	S	M	G	I	Y	A	S	M	A	V	A	A	.	F	I	G	L	V	W	Q	M	K	M	A	N	L	A	V	A	A	M
Query Conservation																											.																																				.
Alig confidence																											.																																				.
Template Conservation
Template Sequence		P	K	I	L	F	G	L	T	L	L	L	V	I	T	A	V	I	S	L	G	I	G	R	Y	S	L	S	V	P	Q	I	D	P	V	Q	Q	Q	V	I	F	Q	V	R	L	P	R	I	L	T	A	L	C	V	G	A	G	L	A	L	S	G	V	V	L	Q	G	I	F	R	N	P	L	V	N	P	H	I	I	G	V
Template Known Secondary structure																				T	T	S	S	T	T			S	S														T																										T	T		T	T			T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	I	G	A	V	F	T	F	I	A	L	V	T	G	S	A	W	G	K	P	M	W	G	T	W	W	V	W	D	A	R	L	T	S	E	L	V	L	L	F	L	Y	V	G	V	I	A	L	W	H	A	F	D	D	R	R	L	A	G	R	A	A	G	I	L	V	L	I	G	V	V	N	L	P	I	I	H	Y	S
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	S	G	S	A	F	G	G	T	L	A	I	F	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	L	Y	G	L	F	T	S	T	I	L	F	G	F	G	T	L	A	L	V	F	L	F	S	F	K	S	L	L	M	L	I	L	I	G	M	I	L	S	G	L	F	S	A	L	V	S	L	L
Template Known Secondary structure															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		V	E	W	W	N	T	L	H	Q	G	S	T	R	M	Q	.	.	.	Q	S	I	D	P	A	M	R	S	P	L	R	W	S	I	F	G	F	L	L	L	S	A	T	L	T	L	M	R	M	R	N	L	I	L	L	M	E	K	R	R	P	W	V	S	E	L	I	L	K	R	G	R
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		Q	Y	I	S	D	T	E	E	K	L	P	S	I	V	F	W	L	M	G	S	F	A	T	S	N	W	E	K	L	L	F	F	F	V	P	F	L	L	C	S	S	I	L	L	S	L	S	W	R	L	N	L	L	S	L	D	E	K	E	A	K	A	L	G	V	K	M	A	P	L	R
Template Known Secondary structure				S	S		T	T	T									T	T			S	T	T																							T	T	T	G	G	G	G	G	G	S								T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions