Return to main results Retrieve Phyre Job Id

Job DescriptionP45395
Confidence99.58%DateThu Jan 5 12:02:32 GMT 2012
Rank95Aligned Residues116
% Identity16%Templatec3oi8B_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: the crystal structure of functionally unknown conserved protein domain2 from neisseria meningitidis mc58
Resolution1.99 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210.........220.........230.........240...... ...250.........260.........270.........280..
Predicted Secondary structure 
















.














Query SS confidence 










































.



































Query Sequence  LRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDN. MMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGI
Query Conservation    
 


     
  
    

 


  
       
 


  .
 
 



  

 
 
          
 


     
Alig confidence 










































.




















....










Template Conservation    
  



    
 
     
  
             

        
 
              ....           
Template Sequence  LEVRDAXITRSRXNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLLKYXFNPEQ. . . . FHLKSILRPAV
Template Known Secondary structure 
B
GGG


TT



SSSSTT
GGGGGGGTT
GGG....

GGGS
B


Template Predicted Secondary structure 

























....






Template SS confidence 















































































   58.60.........70.........80.........90.........100.........110.........120.. .......130...
 
   283......290.........300.........310 .........320...
Predicted Secondary structure 









.
Query SS confidence 



























.












Query Sequence  RVRPGILAVEALNLMQSRHITSVMVADG. DHLLGVLHMHDLL
Query Conservation   
        

  
       
 


 .   




  


Alig confidence 



























.












Template Conservation   
     
   
  
       
 


  
  




  


Template Sequence  FVPEGKSLTALLKEFREQRNHXAIVIDEYGGTSGLVTFEDII
Template Known Secondary structure  TT
BT


TTS

Template Predicted Secondary structure 













Template SS confidence 









































   134.....140.........150.........160.........170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions