Job Description P45395 Confidence 99.72% Date Thu Jan 5 12:02:32 GMT 2012 Rank 73 Aligned Residues 117 % Identity 17% Template c3ocmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:putative membrane protein; PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		L	R	V	N	D	I	M	H	T	G	D	E	I	P	H	V	K	K	T	A	S	L	R	D	A	L	L	E	V	T	R	K	N	L	G	M	T	V	I	C	D	D	N	.	M	M	I	E	G	I	F	T	D	G	D	L	R	R	V	F	D	M	G	V	D	V	R	Q	L	S	I	A	D	V	M	T	P	G	G	I
Query Conservation																																													.
Alig confidence																																													.																										.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		R	S	I	R	S	I	X	T	P	R	T	D	V	S	W	V	N	I	D	D	D	A	A	T	I	R	Q	Q	L	T	A	A	P	H	S	F	F	P	V	C	R	G	S	L	D	E	V	V	G	I	G	R	A	K	D	L	V	A	D	L	I	T	E	G	R	V	R	R	N	.	.	.	.	.	R	L	R	D	P	I
Template Known Secondary structure		S		S	T	T	T	S			G	G	G						T	T	S												S	S		S						S	S	S	T	T	S																		S	S			G	G	.	.	.	.	.	G	S	B
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400						.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		R	V	R	P	G	I	L	A	V	E	A	L	N	L	M	Q	S	R	H	I	T	S	V	M	V	A	D	G	.	D	H	L	L	G	V	L	H	M	H	D	L	L	R	A
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		I	V	H	E	S	I	G	I	L	R	L	X	D	T	L	K	R	S	R	G	Q	L	V	L	V	A	D	E	F	G	A	I	E	G	L	V	T	P	I	D	V	F	E	A
Template Known Secondary structure					G	G	G												S	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions