Job Description P45395 Confidence 56.10% Date Thu Jan 5 12:02:32 GMT 2012 Rank 247 Aligned Residues 89 % Identity 11% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	S	T	G	T	P	S	F	F	V	H	P	G	E	A	A	H	G	D	L	G	M	V	T	P	Q	D	V	V	I	A	I	S	N	S	G	E	S	S	.	E	I	T	A	L	I	P	V	L	K	R	L	H	V	P	L	I
Query Conservation																																																																.
Alig confidence										.	.																																																					.									.	.
Template Conservation										.	.																																																														.	.
Template Sequence		R	Q	R	I	L	V	V	D	.	.	D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	.	.	D	S	G	V	P	I	V
Template Known Secondary structure										.	.	S															T	T									G	G	G											S						S	S		S	S	S												.	.
Template Predicted Secondary structure										.	.																																																														.	.
Template SS confidence
		5	.	.	.	.	10	.	.			.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80
		128	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	T	G	R	P	E	S	S	M	A	R	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	T	A	K	T	D	T	V	D	V	V	L	G
Template Known Secondary structure						T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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