Return to main results Retrieve Phyre Job Id

Job DescriptionP45395
Confidence99.71%DateThu Jan 5 12:02:32 GMT 2012
Rank76Aligned Residues116
% Identity21%Templatec3kpbA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:uncharacterized protein mj0100; PDBTitle: crystal structure of the cbs domain pair of protein mj01002 in complex with 5 -methylthioadenosine and s-adenosyl-l-3 methionine.
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210.........220.........230.........240.........250.........260.........270.........280...
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  LRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIR
Query Conservation    
 


     
  
    

 


  
       
 


  
 
 



  

 
 
          
 


      
Alig confidence 








..




















































....











Template Conservation 
 
 


  ..    
    

 

   
         
 
                       ....            
Template Sequence  TLVKDILSK. . PPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNKK. . . . TIEEIMTRNVIT
Template Known Secondary structure 
B

S..



TTSBT
S

TTSB
TT

....BGGGTSBSS


Template Predicted Secondary structure 




..
























....





Template SS confidence 















































































   388.390...... ...400.........410.........420.........430.........440......... 450.........460.
 
   284.....290.........300.........310 .........320.....
Predicted Secondary structure 









.

Query SS confidence 


























.














Query Sequence  VRPGILAVEALNLMQSRHITSVMVADG. DHLLGVLHMHDLLRA
Query Conservation 
        

  
       
 


 .   




  


 
Alig confidence 


























.














Template Conservation 
     
      
       




  
 





  


  
Template Sequence  AHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRL
Template Known Secondary structure  TTSBT
S
TT
B
Template Predicted Secondary structure 













Template SS confidence 










































   462.......470.........480.........490.........500....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions