|   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | V | L | A | I | E | R | E | C | L | A | E | L | D | Q | Y | I | N | Q | N | F | T | L | A | C | E | K | M | F | W | C | . |
. |
. |
K | G | K | V | V | V | M | G | M | G | K | S | G | H | I | G | R | K | M | A | A | T | F | A | S | T | G | T | P | S | F | F | V | H | P | G | E | A | A | H | G | D | L | G | M | V |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |   | . | . | . |   |   |
|
|   |
|   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|   |
|   |
|
| . | . |
|   |   |
|   |   |   |
|
|   |
|   |
|   |
|
|   |   |
|   |
|   |   |   | . | . | . | . | . | . |   |   |
|
Template Sequence |   |
K | I | L | A | T | Q | F | N | G | K | L | Q | T | L | T | K | Q | E | D | E | L | F | D | V | V | R | L | L | A | Q | A | L | V | G | Q | G | K | V | Y | L | D | A | Y | G | E | . |
. |
F | E | G | L | Y | P | X | L | S | D | G | P | D | Q | X | K | R | V | T | K | I | K | D | H | . |
. |
. |
. |
. |
. |
K | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
| G | G | . | . | G | G | G | G |  |  |  |  |  |  | S | T | T |
|
| T | T |  |  |  |
|
| T | T | . | . | . | . | . | . |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
|
|
|
|
|
. | . | . |
  |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | |
|
|
. | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | Q | D | V | V | I | A | I | S | N | S | G | E | S | S | E | I | T | A | L | I | P | V | L | K | R | L | H | V | P | L | I | C | I | T | G | R | P | E | S | S | M | A | R | A | A | D | V | H | L | C | V | K | V | A | K | E | A | C | P | L | G | L | . |
. |
. |
A | P | T | S | S | T | T | A | T | L | V | M | G |
Query Conservation |   |
  |   |   |
|
|
|
|   |
|
|   |
|
|   |
|   |
|   |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   | . | . | . |
|
|
|   |
|   |   |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |
|   |   |   |   |
|
|
|
|
|
Template Sequence |   |
H | A | V | D | R | V | L | I | F | T | P | D | T | E | R | S | D | L | L | A | S | L | A | R | Y | D | A | W | H | T | P | Y | S | I | I | T | L | G | D | V | T | E | T | L | E | R | S | I | A | P | L | A | L | K | F | D | K | G | L | L | P | A | E | D | G | S | R | H | G | L | P | S | L | A | L | G | A | F | L | L |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |  |  | S |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  | S | S |
|
|
| T | T | G | G | G | S | S | S |
|  |  |
|
|
|
| S |
| S |  |  |
| T | T | S |
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . |
  |
  |   |
172 | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | A | L | A | V | A | L | L | K |
Query Conservation |   |
|   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
|   |
|
Template Sequence |   |
T | H | I | L | T | Q | L | Q | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
155 | . | . | . | . | 160 | . | . | . |
  |