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Job DescriptionP45395
Confidence99.75%DateThu Jan 5 12:02:32 GMT 2012
Rank59Aligned Residues119
% Identity13%Templatec3i8nB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein vp2912; PDBTitle: a domain of a conserved functionally known protein from2 vibrio parahaemolyticus rimd 2210633.
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   204.....210.........220.........230.........240.... .....250.........260.........270.........280..
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Query Sequence  LRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICD. DNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGI
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Template Sequence  VPVTQVXTPRPVVFRVDATXTINEFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKXQQSGSGQ. . . KQLGAVXRPIQ
Template Known Secondary structure 
BSGGG

TTSB



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SSSTT


TTTTT...SBGGGG
B


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   191........200.........210.........220.........230.........240.........250...... ...260.......
 
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Query Sequence  RVRPGILAVEALNLMQSRHITSVMVADG. DHLLGVLHMHDLLRA
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Template Sequence  VVLNNTALPKVFDQXXTHRLQLALVVDEYGTVLGLVTLEDIFEH
Template Known Secondary structure  TTSBTT
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TT

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   268.270.........280.........290.........300.........310.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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