Job Description P45395 Confidence 44.09% Date Thu Jan 5 12:02:32 GMT 2012
Rank 309 Aligned Residues 90
% Identity 16% Template c3h5iA_
PDB info
PDB header: transcriptionChain: A: PDB Molecule: response regulator/sensory box protein/ggdef
PDBTitle: crystal structure of the n-terminal domain of a response2 regulator/sensory box/ggdef 3-domain protein from3 carboxydothermus hydrogenoformans
Resolution 1.90 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . .
. 110 . . . . . . . . . 120 . . . . . . . .
Predicted Secondary structure  
.
Query SS confidence  
.
Query Sequence  
G K V V V M G M G K S G H I G R K M A A T F A S T G T P S F F V H P G E A A H G D L G M V T P Q D V V I A I S N S G E .
S S E I T A L I P V L K R L H V P L I C
Query Conservation  
                                                                                    .                          
Alig confidence  
. . .
Template Conservation  
. .                                                                                                                    
Template Sequence  
K K I L I V .
.
E D S K F Q A K T I A N I L N K Y G Y T V E I A L T G E A A V E K V S G G W Y P D L I L M D I E L G E G M D G V Q T A L A I Q Q I S E L P V V F
Template Known Secondary structure  
. . S T T S S T T S S S S S S
Template Predicted Secondary structure  
. .
Template SS confidence  
   
4 . . . . .
10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 .
 
   
129 130 . . . . . . . . . 140 .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
I T G R P E S S M A R A A
Query Conservation  
             
Alig confidence  
Template Conservation  
                       
Template Sequence  
L T A H T E P A V V E K I
Template Known Secondary structure  
S S S S G G G
Template Predicted Secondary structure  
Template SS confidence  
   
82 . . . . . . . 90 . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]