Job Description P45395 Confidence 58.70% Date Thu Jan 5 12:02:32 GMT 2012 Rank 237 Aligned Residues 81 % Identity 10% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.																			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	S	T	G	T	P	S	F	F	V	H	P	G	E	A	A	H	G	D	L	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	P	Q	D	V	V	I	A	I	S	N	S	G	E	S	S
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.
Template Sequence		C	N	H	A	L	L	V	G	Y	G	R	.	.	.	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	V	D	E	L	R	E	R	G	V	R	A	V	L	G	N	A	A	N	E	E	I	X	Q	L	A	H	L	E	C	A	K	W	L	I	L	T	I	P	N	G	Y
Template Known Secondary structure			S								S		.	.	.												T	T								S											T	T						S		T	T	S							T	T	G	G	G		S							S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.				.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		E	I	T	A	L	I	P	V	L	K	R	L	H	.	.	V	P	L	I	C	I	T	G	R
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		E	A	G	E	I	V	A	S	A	R	A	K	N	P	D	I	E	I	I	A	R	A	H	Y
Template Known Secondary structure															S	S	S							S	S
Template Predicted Secondary structure
Template SS confidence
		494	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions