Job Description P45395 Confidence 99.77% Date Thu Jan 5 12:02:32 GMT 2012 Rank 45 Aligned Residues 127 % Identity 17% Template c3fwrB_ PDB info PDB header:transcription Chain: B: PDB Molecule:yqzb protein; PDBTitle: crystal structure of the cbs domains from the bacillus subtilis ccpn2 repressor complexed with adp Resolution 2.45 Å

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		196	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		G	A	L	G	R	K	L	L	L	.	R	V	N	D	I	M	H	T	G	D	E	I	P	H	V	K	K	T	A	S	L	R	D	A	L	L	E	V	T	R	K	N	L	G	M	T	V	I	C	D	D	N	M	M	I	E	G	I	F	T	D	G	D	L	R	R	V	F	D	M	G	V	D	V	R	Q	L	S	I	A
Query Conservation											.
Alig confidence											.									.	.			.
Template Conservation																				.	.			.
Template Sequence		Q	L	L	A	D	K	L	K	K	L	Q	V	K	D	F	Q	S	I	.	.	P	V	.	V	I	H	E	N	V	S	V	Y	D	A	I	C	T	M	F	L	E	D	V	G	T	L	F	V	V	D	R	D	A	V	L	V	G	V	L	S	R	K	D	L	L	R	A	S	I	G	Q	Q	E	L	T	S	V	P	V	H
Template Known Secondary structure									T	T		B	G	G	G	S		B		.	.			.				T	T	S	B												T		S							T	T	S	B																	S	S			T	T	S	B
Template Predicted Secondary structure																				.	.			.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		275	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.				.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure				.	.																																	.	.	.			.
Query SS confidence				.	.																																	.	.	.			.
Query Sequence		D	V	.	.	M	T	P	G	G	I	R	V	R	P	G	I	L	A	V	E	A	L	N	L	M	Q	S	R	H	I	T	S	V	M	V	A	.	.	.	D	G	.	D	H	L	L	G	V	L	H	M	H	D	L	L	R	A
Query Conservation				.	.																																	.	.	.			.
Alig confidence				.	.																																	.	.	.			.
Template Conservation
Template Sequence		I	I	M	T	R	M	P	N	I	T	V	C	R	R	E	D	Y	V	M	D	I	A	K	H	L	I	E	K	Q	I	D	A	L	P	V	I	K	D	T	D	K	G	F	E	V	I	G	R	V	T	K	T	N	M	T	K	I
Template Known Secondary structure				S			T	T	S				B		T	T	S	B												T		S									T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions