Job Description P45395 Confidence 71.88% Date Thu Jan 5 12:02:32 GMT 2012 Rank 183 Aligned Residues 89 % Identity 16% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	S	T	G	T	P	S	F	F	V	H	P	G	E	A	A	H	G	D	L	G	M	V	T	P	Q	D	V	V	I	A	I	S	N	S	G	E	S	S	.	E	I	T	A	L	I	P	V	L	K	R	L	H	V	P	L	I
Query Conservation																																																																.
Alig confidence									.	.																																																						.									.	.
Template Conservation									.	.																																																															.	.
Template Sequence		D	K	K	I	L	V	V	.	.	D	D	E	K	P	I	A	D	I	L	E	F	N	L	R	K	E	G	Y	E	V	H	C	A	H	D	G	N	E	A	V	E	M	V	E	E	L	Q	P	D	L	I	L	L	D	I	M	L	P	N	K	D	G	V	E	V	C	R	E	V	R	K	.	.	K	Y	D	M	P	I	I
Template Known Secondary structure									.	.		S																T								S														S						T	T		S	S	S												.	.				S
Template Predicted Secondary structure									.	.																																																															.	.
Template SS confidence
		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.			70	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	T	G	R	P	E	S	S	M	A	R	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	T	A	K	D	S	E	I	D	K	V	I	G
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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