Job Description P45395 Confidence 88.56% Date Thu Jan 5 12:02:32 GMT 2012 Rank 139 Aligned Residues 138 % Identity 17% Template c2xznB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:rps0e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 2 Resolution 3.93 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	L	D	Q	Y	I	N	Q	N	F	T	L	A	C	E	K	M	F	W	C	K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	S	T	G	T	P	S	F	F	V	H	P	G	E	A	A	H	G	D	L	G	M	V	T	P	Q	D	V	V	I	A	I	S	N	S
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		I	E	E	T	W	Q	K	I	.	K	L	A	A	R	V	I	A	A	V	Q	H	P	E	D	V	M	V	V	C	S	R	I	Y	G	Q	R	A	A	I	K	F	A	G	Y	T	H	C	K	S	T	S	S	S	R	W	T	P	G	T	L	T	N	Y	Q	T	L	K	Y	E	E	P	R	V	L	I	V	T	D	P	R
Template Known Secondary structure										.											S	S	G	G	G							S															T		B					S	S			T	T	T	T	T		T	T		S	S					S					S		T	T
Template Predicted Secondary structure										.
Template SS confidence
		46	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	S	S	E	I	T	A	L	I	P	V	L	K	R	L	H	V	P	L	I	C	I	T	G	R	P	E	S	S	M	A	R	A	A	D	V	H	L	C	V	K	V	A	K	E	A	C	P	L	G	L	A	P	T	S	S	T	T	A	T	L	V	M	G	D	A	L	A	V	A	L	L	K	A	R	G
Query Conservation
Alig confidence				.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	.	.	.	.	F	Q	A	I	K	E	A	S	Y	V	N	I	P	V	I	A	L	C	D	S	D	S	P	L	.	.	A	Y	V	D	V	V	I	P	C	N	N	R	.	.	.	.	.	.	.	.	.	.	.	.	S	T	E	S	I	S	M	I	Y	W	M	I	A	R	E	V	K	I	L	R	G
Template Known Secondary structure		T	T	.	.	.	.								T	T	T	T									S	S	S			.	.	T	T							S			S	.	.	.	.	.	.	.	.	.	.	.	.	S																				T
Template Predicted Secondary structure				.	.	.	.																									.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.													.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions