Job Description P45395 Confidence 99.72% Date Thu Jan 5 12:02:32 GMT 2012 Rank 71 Aligned Residues 140 % Identity 14% Template c2v8qE_ PDB info PDB header:transferase Chain: E: PDB Molecule:5'-amp-activated protein kinase subunit gamma-1; PDBTitle: crystal structure of the regulatory fragment of mammalian2 ampk in complexes with amp Resolution 2.10 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	F	A	L	S	H	P	G	G	A	L	G	R	K	L	L	L	R	V	N	D	I	M	H	T	G	D	E	I	P	H	V	K	K	T	A	S	L	R	D	A	L	L	E	V	T	R	K	N	L	G	M	T	V	I	C	D	D	N	M	M	I	E	G	I	F	T	D	G	D	L	R	R	V	F	D	M	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F	L	K	L	F	I	T	E	F	P	K	P	E	F	M	S	K	S	L	E	E	L	Q	I	G	T	Y	A	N	I	A	M	V	R	T	T	T	P	V	Y	V	A	L	G	I	F	V	Q	H	R	V	S	A	L	P	V	V	D	E	K	G	R	V	V	D	I	Y	S	K	F	D	V	I	N	L	A	A	E	K
Template Known Secondary structure								S		S	S	S			G	G	G	G	S	B					T		S	B		S	S						T	T		B														S							T	T	S	B							G	G	G	T	G	G	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		266	.	.	.	270								.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																																									.
Query SS confidence							.	.	.	.	.	.	.																																									.
Query Sequence		V	D	V	R	Q	.	.	.	.	.	.	.	L	S	I	A	D	V	M	T	P	G	G	I	R	V	R	P	G	I	L	A	V	E	A	L	N	L	M	Q	S	R	H	I	T	S	V	M	V	A	D	G	.	D	H	L	L	G	V	L	H	M	H	D	L	L	R	A
Query Conservation							.	.	.	.	.	.	.																																									.
Alig confidence							.	.	.	.	.	.	.																																									.
Template Conservation
Template Sequence		T	Y	N	N	L	D	V	S	V	T	K	A	L	Q	H	R	S	H	Y	F	E	G	V	L	K	C	Y	L	H	E	T	L	E	A	I	I	N	R	L	V	E	A	E	V	H	R	L	V	V	V	D	E	H	D	V	V	K	G	I	V	S	L	S	D	I	L	Q	A
Template Known Secondary structure							S	S	B					G	G	G			S				S						T	T	S	B												T		S							T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions