Job Description P45395 Confidence 85.45% Date Thu Jan 5 12:02:32 GMT 2012 Rank 144 Aligned Residues 139 % Identity 15% Template c2nyaF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:periplasmic nitrate reductase; PDBTitle: crystal structure of the periplasmic nitrate reductase2 (nap) from escherichia coli Resolution 2.50 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																.	.	.	.	.																										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.																										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	N	F	T	L	A	C	E	K	M	F	W	C	.	.	.	.	.	K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	S	.	.	T	G	T	P	S	F	F	V	H	P	G	E	A	A	H	G	D	L	G	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																.	.	.	.	.																										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.																										.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Q	A	F	D	V	M	E	E	K	F	K	T	A	L	K	E	K	G	P	E	S	I	G	M	F	G	S	G	Q	W	T	I	W	E	G	Y	A	A	S	K	L	F	K	A	G	F	R	S	N	N	I	D	P	N	A	R	H	C	M	A	S	A	V	V	G	F	M	R	T	F	G	M	D	E	P	M	G	C	Y
Template Known Secondary structure																			T		G	G	G							T	T	S															T	S								G	G	G	G	T	T												S	S		S		S			G
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
				94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																										.	.	.	.
Query SS confidence		.	.																										.	.	.	.
Query Sequence		.	.	V	T	P	Q	D	V	V	I	A	I	S	N	S	G	E	S	S	E	I	T	A	L	I	P	V	.	.	.	.	L	K	R	L	H	V	P	L	I	C	I	T	G	R	P	E	S	S	M	A	R	A	A	D	V	H	L	C	V	K	V	A	K	E	A	C	P	L	G	L	A	P	T	S	S	T	T	A	T
Query Conservation		.	.																										.	.	.	.
Alig confidence		.	.																										.	.	.	.														.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	D	I	E	Q	A	D	A	F	V	L	W	G	A	N	M	A	E	M	H	P	I	L	W	S	R	I	T	N	R	R	L	S	N	Q	N	V	T	V	A	V	L	S	T	.	Y	Q	H	R	S	F	E	L	A	D	N	G	I	I	F	T	P	Q	S	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	G	G	G	G		S						S							S													T		T	T								S	.	S	B		T	T	G	G	G		S							T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																.	.	.
Query SS confidence																.	.	.
Query Sequence		L	V	M	G	D	A	L	A	V	A	L	L	K	A	.	.	.	R	G	F	T	A	E	D	F	A	L	S	H
Query Conservation																.	.	.
Alig confidence		.	.	.	.	.										.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	V	I	L	N	Y	I	A	N	Y	I	I	Q	N	N	A	I	N	Q	D	F	F	S	K	H
Template Known Secondary structure		.	.	.	.	.													T	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions