Job Description P45395 Confidence 41.45% Date Thu Jan 5 12:02:32 GMT 2012 Rank 321 Aligned Residues 97 % Identity 21% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																																	.								.	.	.
Query SS confidence																																																	.								.	.	.
Query Sequence		L	A	C	E	K	M	F	W	C	K	G	K	V	V	V	M	G	M	G	K	S	G	H	I	G	R	K	M	A	A	T	F	A	S	T	G	T	P	S	F	F	V	H	P	G	E	A	.	A	H	G	D	L	G	M	.	.	.	V	T	P	Q	D	V	V	I	A	I	S	N	S	G	E	S	S	E	I	T	A	L
Query Conservation																																																	.								.	.	.
Alig confidence												.										.	.	.																									.								.	.	.							.	.	.	.	.	.	.
Template Conservation												.										.	.	.																																										.	.	.	.	.	.	.
Template Sequence		E	S	L	Q	F	L	L	D	T	C	.	K	V	L	V	I	G	A	G	G	.	.	.	L	G	C	E	L	L	K	N	L	A	L	S	G	F	R	Q	I	H	V	I	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	.	.	.	.	.	.	.	G	R	P	K	A	E	V	A	A
Template Known Secondary structure										T		.								S	S	.	.	.											T	T	T											B			G	G	G	G	G	T		T	T			G	G	G	T	.	.	.	.	.	.	.	T	S	B
Template Predicted Secondary structure												.										.	.	.																																										.	.	.	.	.	.	.
Template SS confidence
		2040	.	.	.	.	.	.	.	.	.		2050	.	.	.	.	.	.	.	.				.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.	.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.								2100	.	.	.	.	.	.	.	.
		116	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure									.														.	.	.
Query SS confidence									.														.	.	.
Query Sequence		I	P	V	L	K	R	L	.	H	V	P	L	I	C	I	T	G	R	P	E	S	.	.	.	S	M	A	R	A	A	D	V	H	L	C	V
Query Conservation									.														.	.	.
Alig confidence									.														.	.	.
Template Conservation
Template Sequence		E	F	L	N	D	R	V	P	N	C	N	V	V	P	H	F	N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	I	V	C	G
Template Known Secondary structure								S	T	T								S		G	G	G	S							T		S
Template Predicted Secondary structure
Template SS confidence
		2109	2110	.	.	.	.	.	.	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions