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Job DescriptionP45395
Confidence41.45%DateThu Jan 5 12:02:32 GMT 2012
Rank321Aligned Residues97
% Identity21%Templatec2nvuB_
PDB info PDB header:protein turnover, ligaseChain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEA. AHGDLGM. . . VTPQDVVIAISNSGESSEITAL
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Template Sequence  ESLQFLLDTC. KVLVIGAGG. . . LGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDI. . . . . . . GRPKAEVAA
Template Known Secondary structure  T
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SS...TTT



B

GGGGGT
TT

GGGT.......TSB
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   116...120.. .......130..... ....140.......
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Query Sequence  IPVLKRL. HVPLICITGRPES. . . SMARAADVHLCV
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Template Sequence  EFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCG
Template Known Secondary structure  STT
S
GGGS
T
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   21092110.........2120.........2130.........2140....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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